pH-Dependent Conformational Changes in Proteins and Their Effect on Experimental pKas: The Case of Nitrophorin 4

Thermodynamic Coupling of Protonation and Conformational Equilibria in Proteins: Theory and Simulation

(2012) Chuanyin Shi et al.   BIOPHYSICAL JOURNAL

Heterogeneous Kinetics of the Carbon Monoxide Association and Dissociation Reaction to Nitrophorin 4 and 7 Coincide with Structural Heterogeneity of the Gate-Loop

(2012) Stefania Abbruzzetti et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Crystallization and preliminary X-ray crystallographic analysis of the membrane-binding haemprotein nitrophorin 7 fromRhodnius prolixus

(2011) Hideaki Ogata et al.   Acta Crystallographica Section F-Structural Biology and Crystallization Communications

Exploration of the cytochrome c oxidase pathway puzzle and examination of the origin of elusive mutational effects

(2011) Suman Chakrabarty et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Ultrafast Dynamics of Diatomic Ligand Binding to Nitrophorin 4

(2010) Abdelkrim Benabbas et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Remeasuring HEWL pKa values by NMR spectroscopy: Methods, analysis, accuracy, and implications for theoretical pKa calculations

(2010) Helen Webb et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Crucial Role of Asp408 in the Proton Translocation Pathway of Multidrug Transporter AcrB: Evidence from Site-Directed Mutagenesis and Carbodiimide Labeling

(2009) Markus A. Seeger et al.   BIOCHEMISTRY

Molecular Basis for the pH Dependent Structural Transition of Nitrophorin 4

(2009) Marcelo A. Martí et al.   JOURNAL OF PHYSICAL CHEMISTRY B

pH-Dependent Mechanism of Nitric Oxide Release in Nitrophorins 2 and 4

(2009) Jason M. Swails et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Effect of Mutation of Carboxyl Side-Chain Amino Acids Near the Heme on the Midpoint Potentials and Ligand Binding Constants of Nitrophorin 2 and Its NO, Histamine, and Imidazole Complexes

(2009) Robert E. Berry et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Improving the analysis of NMR spectra tracking pH-induced conformational changes: Removing artefacts of the electric field on the NMR chemical shift

(2009) Predrag Kukić et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Backbone Relaxation Coupled to the Ionization of Internal Groups in Proteins: A Self-Guided Langevin Dynamics Study

(2008) Ana Damjanović et al.   BIOPHYSICAL JOURNAL

Electrostatic Effects in a Network of Polar and Ionizable Groups in Staphylococcal Nuclease

(2008) Kelli L. Baran et al.   JOURNAL OF MOLECULAR BIOLOGY

Bond or Cage Effect:  How Nitrophorins Transport and Release Nitric Oxide

(2008) Marcelo A. Martí et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY