Conversion of KEGG metabolic pathways to SBGN maps including automatic layout

VANTED v2: a framework for systems biology applications

(2012) Hendrik Rohn et al.   BMC Systems Biology

MGV: a generic graph viewer for comparative omics data

(2011) Stephan Symons et al.   BIOINFORMATICS

KEGGtranslator: visualizing and converting the KEGG PATHWAY database to various formats

(2011) Clemens Wrzodek et al.   BIOINFORMATICS

IPAVS: Integrated Pathway Resources, Analysis and Visualization System

(2011) Pradeep Kumar Sreenivasaiah et al.   NUCLEIC ACIDS RESEARCH

MetaCrop 2.0: managing and exploring information about crop plant metabolism

(2011) F. Schreiber et al.   NUCLEIC ACIDS RESEARCH

The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases

(2011) R. Caspi et al.   NUCLEIC ACIDS RESEARCH

KEGG for integration and interpretation of large-scale molecular data sets

(2011) M. Kanehisa et al.   NUCLEIC ACIDS RESEARCH

Editing, validating and translating of SBGN maps

(2010) T. Czauderna et al.   BIOINFORMATICS

Arcadia: a visualization tool for metabolic pathways

(2010) Alice C. Villéger et al.   BIOINFORMATICS

BioModels Database: An enhanced, curated and annotated resource for published quantitative kinetic models

(2010) Chen Li et al.   BMC Systems Biology

Reactome: a database of reactions, pathways and biological processes

(2010) D. Croft et al.   NUCLEIC ACIDS RESEARCH

Creation of a Genome-Wide Metabolic Pathway Database for Populus trichocarpa Using a New Approach for Reconstruction and Curation of Metabolic Pathways for Plants

(2010) P. Zhang et al.   PLANT PHYSIOLOGY

A generic algorithm for layout of biological networks

(2009) Falk Schreiber et al.   BMC BIOINFORMATICS

The Systems Biology Graphical Notation

(2009) Nicolas Le Novère et al.   NATURE BIOTECHNOLOGY