IPAVS: Integrated Pathway Resources, Analysis and Visualization System

Gene set enrichment; a problem of pathways

(2011) M. N. Davies et al.   Briefings in Functional Genomics

Payao: a community platform for SBML pathway model curation

(2010) Y. Matsuoka et al.   BIOINFORMATICS

Lists2Networks: Integrated analysis of gene/protein lists

(2010) Alexander Lachmann et al.   BMC BIOINFORMATICS

Biology of Endoplasmic Reticulum Stress in the Heart

(2010) Jody Groenendyk et al.   CIRCULATION RESEARCH

Biotransformation pathway maps in WikiPathways enable direct visualization of drug metabolism related expression changes

(2010) Danyel G.J. Jennen et al.   DRUG DISCOVERY TODAY

Human Protein Reference Database and Human Proteinpedia as Discovery Resources for Molecular Biotechnology

(2010) Renu Goel et al.   MOLECULAR BIOTECHNOLOGY

The BioPAX community standard for pathway data sharing

(2010) Emek Demir et al.   NATURE BIOTECHNOLOGY

Pathway Commons, a web resource for biological pathway data

(2010) E. G. Cerami et al.   NUCLEIC ACIDS RESEARCH

ConsensusPathDB: toward a more complete picture of cell biology

(2010) Atanas Kamburov et al.   NUCLEIC ACIDS RESEARCH

Reactome: a database of reactions, pathways and biological processes

(2010) D. Croft et al.   NUCLEIC ACIDS RESEARCH

Finding the Right Questions: Exploratory Pathway Analysis to Enhance Biological Discovery in Large Datasets

(2010) Thomas Kelder et al.   PLOS BIOLOGY

The Systems Biology Graphical Notation

(2009) Nicolas Le Novère et al.   NATURE BIOTECHNOLOGY

SMPDB: The Small Molecule Pathway Database

(2009) Alex Frolkis et al.   NUCLEIC ACIDS RESEARCH

KEGG for representation and analysis of molecular networks involving diseases and drugs

(2009) Minoru Kanehisa et al.   NUCLEIC ACIDS RESEARCH

PANTHER version 7: improved phylogenetic trees, orthologs and collaboration with the Gene Ontology Consortium

(2009) Huaiyu Mi et al.   NUCLEIC ACIDS RESEARCH

MINT, the molecular interaction database: 2009 update

(2009) Arnaud Ceol et al.   NUCLEIC ACIDS RESEARCH

The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases

(2009) Ron Caspi et al.   NUCLEIC ACIDS RESEARCH

New feature: pathways and important genes from PharmGKB

(2009) Michel Eichelbaum et al.   Pharmacogenetics and Genomics

A comprehensive modular map of molecular interactions in RB/E2F pathway

(2008) Laurence Calzone et al.   Molecular Systems Biology

PID: the Pathway Interaction Database

(2008) Carl F. Schaefer et al.   NUCLEIC ACIDS RESEARCH

CellDesigner 3.5: A Versatile Modeling Tool for Biochemical Networks

(2008) A. Funahashi et al.   PROCEEDINGS OF THE IEEE