Genecentric: a package to uncover graph-theoretic structure in high-throughput epistasis data

Putting genetic interactions in context through a global modular decomposition

(2011) Jeremy Bellay et al.   GENOME RESEARCH

Inferring Mechanisms of Compensation from E-MAP and SGA Data Using Local Search Algorithms for Max Cut

(2011) Mark D.M. Leiserson et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

Extracting Between-Pathway Models from E-MAP Interactions Using Expected Graph Compression

(2011) David R. Kelley et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

Membrane-trafficking sorting hubs: cooperation between PI4P and small GTPases at the trans-Golgi network

(2011) Felipe H. Santiago-Tirado et al.   TRENDS IN CELL BIOLOGY

Identification of the first COG–CDG patient of Indian origin

(2010) Bobby G. Ng et al.   MOLECULAR GENETICS AND METABOLISM

A plasma-membrane E-MAP reveals links of the eisosome with sphingolipid metabolism and endosomal trafficking

(2010) Pablo S Aguilar et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Fault Tolerance in Protein Interaction Networks: Stable Bipartite Subgraphs and Redundant Pathways

(2009) Arthur Brady et al.   PLoS One

The COG Complex, Rab6 and COPI Define a Novel Golgi Retrograde Trafficking Pathway that is Exploited by SubAB Toxin

(2009) Richard D. Smith et al.   TRAFFIC

Mapping Genetically Compensatory Pathways from Synthetic Lethal Interactions in Yeast

(2008) Xiaotu Ma et al.   PLoS One

Functional Maps of Protein Complexes from Quantitative Genetic Interaction Data

(2008) Sourav Bandyopadhyay et al.   PLoS Computational Biology