PyMS: a Python toolkit for processing of gas chromatography-mass spectrometry (GC-MS) data. Application and comparative study of selected tools

A software complement to AMDIS for processing GC-MS metabolomic data

(2011) Volker Behrends et al.   ANALYTICAL BIOCHEMISTRY

Acid Stress-Mediated Metabolic Shift in Lactobacillus sanfranciscensis LSCE1

(2011) Diana I. Serrazanetti et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Metab: an R package for high-throughput analysis of metabolomics data generated by GC-MS

(2011) R. Aggio et al.   BIOINFORMATICS

Mass Spectrometry Strategies in Metabolomics

(2011) Zhentian Lei et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Evaluation of automated sample preparation, retention time locked gas chromatography–mass spectrometry and data analysis methods for the metabolomic study of Arabidopsis species

(2011) Qun Gu et al.   JOURNAL OF CHROMATOGRAPHY A

Web-based inference of biological patterns, functions and pathways from metabolomic data using MetaboAnalyst

(2011) Jianguo Xia et al.   Nature Protocols

Metabolite identification by mass spectrometry: forty years of evolution

(2011) Pat Wright   XENOBIOTICA

Advances in metabolite identification

(2011) David S Wishart   Bioanalysis

Metabolite Differentiation and Discovery Lab (MeDDL): A New Tool for Biomarker Discovery and Mass Spectral Visualization

(2010) Claude C. Grigsby et al.   ANALYTICAL CHEMISTRY

mMass3: A Cross-Platform Software Environment for Precise Analysis of Mass Spectrometric Data

(2010) Martin Strohalm et al.   ANALYTICAL CHEMISTRY

Metabolomics study on the anti-depression effect of xiaoyaosan on rat model of chronic unpredictable mild stress

(2010) Yuntao Dai et al.   JOURNAL OF ETHNOPHARMACOLOGY

MassBank: a public repository for sharing mass spectral data for life sciences

(2010) Hisayuki Horai et al.   JOURNAL OF MASS SPECTROMETRY

Untargeted metabolic profiling reveals potential biomarkers in myocardial infarction and its application

(2010) Hong Yao et al.   Molecular BioSystems

A general-purpose baseline estimation algorithm for spectroscopic data

(2009) Donald A. Barkauskas et al.   ANALYTICA CHIMICA ACTA

MetAlign: Interface-Driven, Versatile Metabolomics Tool for Hyphenated Full-Scan Mass Spectrometry Data Preprocessing

(2009) Arjen Lommen   ANALYTICAL CHEMISTRY

MetaboliteDetector: Comprehensive Analysis Tool for Targeted and Nontargeted GC/MS Based Metabolome Analysis

(2009) Karsten Hiller et al.   ANALYTICAL CHEMISTRY

ChromA: signal-based retention time alignment for chromatography–mass spectrometry data

(2009) Nils Hoffmann et al.   BIOINFORMATICS

Plant Phenotype Demarcation Using Nontargeted LC-MS and GC-MS Metabolite Profiling

(2009) Vicent Arbona et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Extraction of pure components from overlapped signals in gas chromatography-mass spectrometry (GC-MS)

(2009) Vladimir A Likić   BioData Mining

TagFinder for the quantitative analysis of gas chromatography—mass spectrometry (GC-MS)-based metabolite profiling experiments

(2008) Alexander Luedemann et al.   BIOINFORMATICS

Baseline Correction for NMR Spectroscopic Metabolomics Data Analysis

(2008) Yuanxin Xi et al.   BMC BIOINFORMATICS

An iterative block-shifting approach to retention time alignment that preserves the shape and area of gas chromatography-mass spectrometry peaks

(2008) Minho Chae et al.   BMC BIOINFORMATICS

Metabolite Profiling of Germinating Rice Seeds

(2008) Xiao-Li Shu et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Feature detection and alignment of hyphenated chromatographic–mass spectrometric data

(2008) K. Magnus Åberg et al.   JOURNAL OF CHROMATOGRAPHY A

Standardizing GC–MS metabolomics

(2008) Harin Kanani et al.   JOURNAL OF CHROMATOGRAPHY B-ANALYTICAL TECHNOLOGIES IN THE BIOMEDICAL AND LIFE SCIENCES

Gas chromatography/mass spectrometry in metabolic profiling of biological fluids

(2008) Kishore K. Pasikanti et al.   JOURNAL OF CHROMATOGRAPHY B-ANALYTICAL TECHNOLOGIES IN THE BIOMEDICAL AND LIFE SCIENCES

Wavelet filtering before spike detection preserves waveform shape and enhances single-unit discrimination

(2008) Alexander B. Wiltschko et al.   JOURNAL OF NEUROSCIENCE METHODS

Extending the breadth of metabolite profiling by gas chromatography coupled to mass spectrometry

(2008) Oliver Fiehn   TRAC-TRENDS IN ANALYTICAL CHEMISTRY