Genome-scale analyses of butanol tolerance in Saccharomyces cerevisiae reveal an essential role of protein degradation

Substrate Specificity of Thiamine Pyrophosphate-Dependent 2-Oxo-Acid Decarboxylases in Saccharomyces cerevisiae

(2012) Gabriele Romagnoli et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Evolutionary engineering strategies to enhance tolerance of xylose utilizing recombinant yeast to inhibitors derived from spruce biomass

(2012) Rakesh Koppram et al.   Biotechnology for Biofuels

Metabolic engineering of Saccharomyces cerevisiae: a key cell factory platform for future biorefineries

(2012) Kuk-Ki Hong et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

The Ubiquitin-Proteasome System of Saccharomyces cerevisiae

(2012) D. Finley et al.   GENETICS

Participation of CWI, HOG and Calcineurin pathways in the tolerance of Saccharomyces cerevisiae to low pH by inorganic acid

(2012) R.M. Lucena et al.   JOURNAL OF APPLIED MICROBIOLOGY

An internal deletion in MTH1 enables growth on glucose of pyruvate-decarboxylase negative, non-fermentative Saccharomyces cerevisiae

(2012) Bart Oud et al.   Microbial Cell Factories

De novo sequencing, assembly and analysis of the genome of the laboratory strain Saccharomyces cerevisiae CEN.PK113-7D, a model for modern industrial biotechnology

(2012) Jurgen F Nijkamp et al.   Microbial Cell Factories

Driving Forces Enable High-Titer Anaerobic 1-Butanol Synthesis in Escherichia coli

(2011) Claire R. Shen et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Whole genome sequencing of Saccharomyces cerevisiae: from genotype to phenotype for improved metabolic engineering applications

(2011) José Otero et al.   BMC GENOMICS

Fermentative production of butanol—the academic perspective

(2011) Peter Dürre   CURRENT OPINION IN BIOTECHNOLOGY

Genome-wide analytical approaches for reverse metabolic engineering of industrially relevant phenotypes in yeast

(2011) Bart Oud et al.   FEMS YEAST RESEARCH

Genomic Library Screens for Genes Involved in n-Butanol Tolerance in Escherichia coli

(2011) Luis H. Reyes et al.   PLoS One

Reconstructing the clostridial n-butanol metabolic pathway in Lactobacillus brevis

(2010) Oksana V. Berezina et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Fast and accurate long-read alignment with Burrows–Wheeler transform

(2010) Heng Li et al.   BIOINFORMATICS

Genome-wide identification of genes involved in tolerance to various environmental stresses inSaccharomyces cerevisiae

(2010) C. Auesukaree et al.   JOURNAL OF APPLIED GENETICS

Evolution, genomic analysis, and reconstruction of isobutanol tolerance in Escherichia coli

(2010) Shota Atsumi et al.   Molecular Systems Biology

Genotype to Phenotype: A Complex Problem

(2010) R. D. Dowell et al.   SCIENCE

Ether-zymolyase ascospore isolation procedure: an efficient protocol for ascospores isolation in Saccharomyces cerevisiae yeast

(2010) Moran Bahalul et al.   YEAST

Involvement of Vacuolar Sequestration and Active Transport in Tolerance of Saccharomyces cerevisiae to Hop Iso- -Acids

(2009) L. A. Hazelwood et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Combinatorial effects of environmental parameters on transcriptional regulation in Saccharomyces cerevisiae: A quantitative analysis of a compendium of chemostat-based transcriptome data

(2009) Theo A Knijnenburg et al.   BMC GENOMICS

Problems with the microbial production of butanol

(2009) Yan-Ning Zheng et al.   JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY

Engineering alternative butanol production platforms in heterologous bacteria

(2009) David R. Nielsen et al.   METABOLIC ENGINEERING

How microbes tolerate ethanol and butanol

(2009) Siqing Liu et al.   New Biotechnology

Remodeling of the SCF complex-mediated ubiquitination system by compositional alteration of incorporated F-box proteins

(2009) Mitsunori Kato et al.   PROTEOMICS

Butanol Tolerance in a Selection of Microorganisms

(2008) Eric P. Knoshaug et al.   APPLIED BIOCHEMISTRY AND BIOTECHNOLOGY

Fermentative butanol production by clostridia

(2008) Sang Yup Lee et al.   BIOTECHNOLOGY AND BIOENGINEERING

Disruption of Rpn4-Induced Proteasome Expression in Saccharomyces cerevisiae Reduces Cell Viability Under Stressed Conditions

(2008) X. Wang et al.   GENETICS

Selection and optimization of microbial hosts for biofuels production

(2008) Curt R. Fischer et al.   METABOLIC ENGINEERING

Metabolic engineering of Escherichia coli for 1-butanol production

(2007) Shota Atsumi et al.   METABOLIC ENGINEERING