Capturing the time-varying drivers of an epidemic using stochastic dynamical systems

Statistical methods for the prospective detection of infectious disease outbreaks: a review

(2011) Steffen Unkel et al.   JOURNAL OF THE ROYAL STATISTICAL SOCIETY SERIES A-STATISTICS IN SOCIETY

Mechanistic modelling of the three waves of the 1918 influenza pandemic

(2011) DaiHai He et al.   Theoretical Ecology

Inference for Nonlinear Epidemiological Models Using Genealogies and Time Series

(2011) David A. Rasmussen et al.   PLoS Computational Biology

Joint estimation of the basic reproduction number and generation time parameters for infectious disease outbreaks

(2010) J. T. Griffin et al.   BIOSTATISTICS

Particle Markov chain Monte Carlo methods

(2010) Christophe Andrieu et al.   JOURNAL OF THE ROYAL STATISTICAL SOCIETY SERIES B-STATISTICAL METHODOLOGY

Incidence of 2009 pandemic influenza A H1N1 infection in England: a cross-sectional serological study

(2010) Elizabeth Miller et al.   LANCET

Vaccination against pandemic influenza A/H1N1v in England: A real-time economic evaluation

(2010) Marc Baguelin et al.   VACCINE

Time series analysis via mechanistic models

(2009) Carles Bretó et al.   Annals of Applied Statistics

Examples of Adaptive MCMC

(2009) Gareth O. Roberts et al.   JOURNAL OF COMPUTATIONAL AND GRAPHICAL STATISTICS

Parameter estimation for partially observed hypoelliptic diffusions

(2009) Yvo Pokern et al.   JOURNAL OF THE ROYAL STATISTICAL SOCIETY SERIES B-STATISTICAL METHODOLOGY

Absolute humidity modulates influenza survival, transmission, and seasonality

(2009) J. Shaman et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Temporal Variability and Social Heterogeneity in Disease Transmission: The Case of SARS in Hong Kong

(2009) Anne Cori et al.   PLoS Computational Biology

Likelihood-based estimation of continuous-time epidemic models from time-series data: application to measles transmission in London

(2008) S. Cauchemez et al.   Journal of the Royal Society Interface

Estimating the impact of school closure on influenza transmission from Sentinel data

(2008) Simon Cauchemez et al.   NATURE

Bayesian inference for nonlinear multivariate diffusion models observed with error

(2007) A. Golightly et al.   COMPUTATIONAL STATISTICS & DATA ANALYSIS