A theoretical method to compute sequence dependent configurational properties in charged polymers and proteins

Unfolded protein ensembles, folding trajectories, and refolding rate prediction

(2013) A. Das et al.   JOURNAL OF CHEMICAL PHYSICS

Long Timestep Molecular Dynamics on the Graphical Processing Unit

(2013) James C. Sweet et al.   Journal of Chemical Theory and Computation

Single-Molecule Spectroscopy of Cold Denaturation and the Temperature-Induced Collapse of Unfolded Proteins

(2013) Mikayel Aznauryan et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Conformations of intrinsically disordered proteins are influenced by linear sequence distributions of oppositely charged residues

(2013) R. K. Das et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The stability ofTaqDNA polymerase results from a reduced entropic folding penalty; identification of other thermophilic proteins with similar folding thermodynamics

(2013) Chin-Chi Liu et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Why and how does native topology dictate the folding speed of a protein?

(2012) Mark Rustad et al.   JOURNAL OF CHEMICAL PHYSICS

Structure and Dynamics of an Unfolded Protein Examined by Molecular Dynamics Simulation

(2012) Kresten Lindorff-Larsen et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Polymer scaling laws of unfolded and intrinsically disordered proteins quantified with single-molecule spectroscopy

(2012) H. Hofmann et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Intrinsically disordered proteins: a 10-year recap

(2012) Peter Tompa   TRENDS IN BIOCHEMICAL SCIENCES

How Do Thermophilic Proteins and Proteomes Withstand High Temperature?

(2011) Lucas Sawle et al.   BIOPHYSICAL JOURNAL

Unstructural biology coming of age

(2011) Peter Tompa   CURRENT OPINION IN STRUCTURAL BIOLOGY

Intrinsically disordered proteins from A to Z

(2011) Vladimir N. Uversky   INTERNATIONAL JOURNAL OF BIOCHEMISTRY & CELL BIOLOGY

A novel scoring function for discriminating hyperthermophilic and mesophilic proteins with application to predicting relative thermostability of protein mutants

(2010) Yunqi Li et al.   BMC BIOINFORMATICS

Unfolded-State Dynamics and Structure of Protein L Characterized by Simulation and Experiment

(2010) Vincent A. Voelz et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Effective Charge and Coil−Globule Transition of a Polyelectrolyte Chain

(2010) Arindam Kundagrami et al.   MACROMOLECULES

Net charge per residue modulates conformational ensembles of intrinsically disordered proteins

(2010) A. H. Mao et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Charge interactions can dominate the dimensions of intrinsically disordered proteins

(2010) S. Muller-Spath et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Theory for Protein Folding Cooperativity: Helix Bundles

(2009) Kingshuk Ghosh et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY