Adaptive hybrid simulations for multiscale stochastic reaction networks

Direct Solution of the Chemical Master Equation Using Quantized Tensor Trains

(2014) Vladimir Kazeev et al.   PLoS Computational Biology

Separation of time-scales and model reduction for stochastic reaction networks

(2013) Hye-Won Kang et al.   ANNALS OF APPLIED PROBABILITY

Markovian dynamics on complex reaction networks

(2013) J. Goutsias et al.   PHYSICS REPORTS-REVIEW SECTION OF PHYSICS LETTERS

Convergence of stochastic gene networks to hybrid piecewise deterministic processes

(2012) A. Crudu et al.   ANNALS OF APPLIED PROBABILITY

Product-Form Stationary Distributions for Deficiency Zero Chemical Reaction Networks

(2010) David F. Anderson et al.   BULLETIN OF MATHEMATICAL BIOLOGY

Hybrid stochastic simplifications for multiscale gene networks

(2009) Alina Crudu et al.   BMC Systems Biology

Biochemical simulations: stochastic, approximate stochastic and hybrid approaches

(2009) J. Pahle   BRIEFINGS IN BIOINFORMATICS

A diffusional bimolecular propensity function

(2009) Daniel T. Gillespie   JOURNAL OF CHEMICAL PHYSICS

Robust simplifications of multiscale biochemical networks

(2008) Ovidiu Radulescu et al.   BMC Systems Biology