GUILDify: a web server for phenotypic characterization of genes through biological data integration and network-based prioritization algorithms

NetworkPrioritizer: a versatile tool for network-based prioritization of candidate disease genes or other molecules

(2013) T. Kacprowski et al.   BIOINFORMATICS

A Transcriptome-proteome Integrated Network Identifies Endoplasmic Reticulum thiol oxidoreductase (ERp57) as a Hub that Mediates Bone Metastasis

(2013) Naiara Santana-Codina et al.   MOLECULAR & CELLULAR PROTEOMICS

A travel guide to Cytoscape plugins

(2012) Rintaro Saito et al.   NATURE METHODS

Exploiting Protein-Protein Interaction Networks for Genome-Wide Disease-Gene Prioritization

(2012) Emre Guney et al.   PLoS One

PRINCIPLE: a tool for associating genes with diseases via network propagation

(2011) A. Gottlieb et al.   BIOINFORMATICS

Biana: a software framework for compiling biological interactions and analyzing networks

(2010) Javier Garcia-Garcia et al.   BMC BIOINFORMATICS

A guide to web tools to prioritize candidate genes

(2010) L.-C. Tranchevent et al.   BRIEFINGS IN BIOINFORMATICS

Network medicine: a network-based approach to human disease

(2010) Albert-László Barabási et al.   NATURE REVIEWS GENETICS

DrugBank 3.0: a comprehensive resource for 'Omics' research on drugs

(2010) C. Knox et al.   NUCLEIC ACIDS RESEARCH

The GeneMANIA prediction server: biological network integration for gene prioritization and predicting gene function

(2010) David Warde-Farley et al.   NUCLEIC ACIDS RESEARCH

Advances in translational bioinformatics: computational approaches for the hunting of disease genes

(2009) M. G. Kann   BRIEFINGS IN BIOINFORMATICS

ToppGene Suite for gene list enrichment analysis and candidate gene prioritization

(2009) J. Chen et al.   NUCLEIC ACIDS RESEARCH

Walking the Interactome for Prioritization of Candidate Disease Genes

(2008) Sebastian Köhler et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Protein networks in disease

(2008) T. Ideker et al.   GENOME RESEARCH