lDDT: a local superposition-free score for comparing protein structures and models using distance difference tests

CAD-score: A new contact area difference-based function for evaluation of protein structural models

(2013) Kliment Olechnovič et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

FlexE: Using Elastic Network Models to Compare Models of Protein Structure

(2012) Alberto Perez et al.   Journal of Chemical Theory and Computation

RPF: a quality assessment tool for protein NMR structures

(2012) Y. J. Huang et al.   NUCLEIC ACIDS RESEARCH

Critical assessment of methods of protein structure prediction (CASP)-round IX

(2011) John Moult et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

CASP9 target classification

(2011) Lisa N. Kinch et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Assessment of template based protein structure predictions in CASP9

(2011) Valerio Mariani et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Assessment of protein structure refinement in CASP9

(2011) Justin L. MacCallum et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Improved Technologies Now Routinely Provide Protein NMR Structures Useful for Molecular Replacement

(2011) Binchen Mao et al.   STRUCTURE

A New Generation of Crystallographic Validation Tools for the Protein Data Bank

(2011) Randy J. Read et al.   STRUCTURE

OpenStructure: a flexible software framework for computational structural biology

(2010) Marco Biasini et al.   BIOINFORMATICS

Automated comparative protein structure modeling with SWISS-MODEL and Swiss-PdbViewer: A historical perspective

(2010) Nicolas Guex et al.   ELECTROPHORESIS

Predicting the accuracy of protein-ligand docking on homology models

(2010) Annalisa Bordogna et al.   JOURNAL OF COMPUTATIONAL CHEMISTRY

Extending CATH: increasing coverage of the protein structure universe and linking structure with function

(2010) A. L. Cuff et al.   NUCLEIC ACIDS RESEARCH

MolProbity: all-atom structure validation for macromolecular crystallography

(2009) Vincent B. Chen et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

The other 90% of the protein: Assessment beyond the Cαs for CASP8 template-based and high-accuracy models

(2009) Daniel A. Keedy et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Improved prediction of protein side-chain conformations with SCWRL4

(2009) Georgii G. Krivov et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Outcome of a Workshop on Applications of Protein Models in Biomedical Research

(2009) Torsten Schwede et al.   STRUCTURE

Analysis of CASP8 targets, predictions and assessment methods

(2009) S. Shi et al.   Database-The Journal of Biological Databases and Curation

On distance and similarity in fold space

(2008) M. J. Sippl   BIOINFORMATICS