Direction pathway analysis of large-scale proteomics data reveals novel features of the insulin action pathway

Enriching the gene set analysis of genome-wide data by incorporating directionality of gene expression and combining statistical hypotheses and methods

(2013) Leif Väremo et al.   NUCLEIC ACIDS RESEARCH

Comprehensive literature review and statistical considerations for microarray meta-analysis

(2012) George C. Tseng et al.   NUCLEIC ACIDS RESEARCH

Novel Systems for Dynamically Assessing Insulin Action in Live Cells Reveals Heterogeneity in the Insulin Response

(2012) James G. Burchfield et al.   TRAFFIC

An adaptively weighted statistic for detecting differential gene expression when combining multiple transcriptomic studies

(2011) Jia Li et al.   Annals of Applied Statistics

Next-generation Akt inhibitors provide greater specificity: effects on glucose metabolism in adipocytes

(2011) Shixiong Tan et al.   BIOCHEMICAL JOURNAL

Integrative set enrichment testing for multiple omics platforms

(2011) Laila M Poisson et al.   BMC BIOINFORMATICS

Quantitative Proteomic Analysis of the Adipocyte Plasma Membrane

(2011) Matthew J. Prior et al.   JOURNAL OF PROTEOME RESEARCH

Pathway Analysis of Expression Data: Deciphering Functional Building Blocks of Complex Diseases

(2011) Frank Emmert-Streib et al.   PLoS Computational Biology

Meta-analysis for pathway enrichment analysis when combining multiple genomic studies

(2010) Kui Shen et al.   BIOINFORMATICS

Insulin Regulates Adipocyte Lipolysis via an Akt-Independent Signaling Pathway

(2010) S. M. Choi et al.   MOLECULAR AND CELLULAR BIOLOGY

Gene set enrichment analysis made simple

(2010) Rafael A Irizarry et al.   STATISTICAL METHODS IN MEDICAL RESEARCH

A general modular framework for gene set enrichment analysis

(2009) Marit Ackermann et al.   BMC BIOINFORMATICS

Variations in the requirement for v-SNAREs in GLUT4 trafficking in adipocytes

(2009) P. Zhao et al.   JOURNAL OF CELL SCIENCE

Gene-set approach for expression pattern analysis

(2008) D. Nam et al.   BRIEFINGS IN BIOINFORMATICS

Rapid Activation of Akt2 Is Sufficient to Stimulate GLUT4 Translocation in 3T3-L1 Adipocytes

(2008) Yvonne Ng et al.   Cell Metabolism

MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

(2008) Jürgen Cox et al.   NATURE BIOTECHNOLOGY

Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists

(2008) Da Wei Huang et al.   NUCLEIC ACIDS RESEARCH