An integrated strategy for prediction uncertainty analysis

A Hierarchical Whole-body Modeling Approach Elucidates the Link betweenin VitroInsulin Signaling andin VivoGlucose Homeostasis

(2011) Elin Nyman et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Riemann manifold Langevin and Hamiltonian Monte Carlo methods

(2011) Mark Girolami et al.   JOURNAL OF THE ROYAL STATISTICAL SOCIETY SERIES B-STATISTICAL METHODOLOGY

Workflow for generating competing hypothesis from models with parameter uncertainty

(2011) D. Gomez-Cabrero et al.   Interface Focus

ABC-SysBio--approximate Bayesian computation in Python with GPU support

(2010) J. Liepe et al.   BIOINFORMATICS

Parameter identification, experimental design and model falsification for biological network models using semidefinite programming

(2010) J. Hasenauer et al.   IET Systems Biology

Mass and Information Feedbacks through Receptor Endocytosis Govern Insulin Signaling as Revealed Using a Parameter-free Modeling Framework

(2010) Cecilia Brännmark et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Guaranteed steady state bounds for uncertain (bio-)chemical processes using infeasibility certificates

(2010) J. Hasenauer et al.   JOURNAL OF PROCESS CONTROL

Structural and practical identifiability analysis of partially observed dynamical models by exploiting the profile likelihood

(2009) A. Raue et al.   BIOINFORMATICS

Estimating Bayes factors via thermodynamic integration and population MCMC

(2009) Ben Calderhead et al.   COMPUTATIONAL STATISTICS & DATA ANALYSIS

Systems biology: model based evaluation and comparison of potential explanations for given biological data

(2009) Gunnar Cedersund et al.   FEBS Journal

Biological pathway kinetic rate constants are scale-invariant

(2008) S. Grandison et al.   BIOINFORMATICS

Dynamical modeling and multi-experiment fitting with PottersWheel

(2008) Thomas Maiwald et al.   BIOINFORMATICS

Approximate Bayesian computation scheme for parameter inference and model selection in dynamical systems

(2008) T. Toni et al.   Journal of the Royal Society Interface