BioContext: an integrated text mining system for large-scale extraction and contextualization of biomolecular events

The GNAT library for local and remote gene mention normalization

(2011) J. Hakenberg et al.   BIOINFORMATICS

GeneTUKit: a software for document-level gene normalization

(2011) M. Huang et al.   BIOINFORMATICS

U-Compare bio-event meta-service: compatible BioNLP event extraction services

(2011) Yoshinobu Kano et al.   BMC BIOINFORMATICS

pubmed2ensembl: A Resource for Mining the Biological Literature on Genes

(2011) Joachim Baran et al.   PLoS One

PubMed and beyond: a survey of web tools for searching biomedical literature

(2011) Z. Lu   Database-The Journal of Biological Databases and Curation

ChemicalTagger: A tool for semantic text-mining in chemistry

(2011) Lezan Hawizy et al.   Journal of Cheminformatics

Complex event extraction at PubMed scale

(2010) J. Bjorne et al.   BIOINFORMATICS

LINNAEUS: A species name identification system for biomedical literature

(2010) Martin Gerner et al.   BMC BIOINFORMATICS

The STRING database in 2011: functional interaction networks of proteins, globally integrated and scored

(2010) D. Szklarczyk et al.   NUCLEIC ACIDS RESEARCH

Beyond genes, proteins, and abstracts: Identifying scientific claims from full-text biomedical articles

(2009) Catherine Blake   JOURNAL OF BIOMEDICAL INFORMATICS

Inter-species normalization of gene mentions with GNAT

(2008) J. Hakenberg et al.   BIOINFORMATICS

Corpus annotation for mining biomedical events from literature

(2008) Jin-Dong Kim et al.   BMC BIOINFORMATICS

Extracting interactions between proteins from the literature

(2008) Deyu Zhou et al.   JOURNAL OF BIOMEDICAL INFORMATICS