Model annotation for synthetic biology: automating model to nucleotide sequence conversion

Standard virtual biological parts: a repository of modular modeling components for synthetic biology

(2010) M. T. Cooling et al.   BIOINFORMATICS

Reprogramming bacteria to seek and destroy an herbicide

(2010) Joy Sinha et al.   Nature Chemical Biology

Comparing genomes to computer operating systems in terms of the topology and evolution of their regulatory control networks

(2010) K.-K. Yan et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Saint: a lightweight integration environment for model annotation

(2009) Allyson L. Lister et al.   BIOINFORMATICS

Designing and encoding models for synthetic biology

(2009) L. Endler et al.   Journal of the Royal Society Interface

Computational design of synthetic gene circuits with composable parts

(2008) M.A. Marchisio et al.   BIOINFORMATICS

The CellML Model Repository

(2008) C. M. Lloyd et al.   BIOINFORMATICS

Metabolic engineering of microorganisms for biofuels production: from bugs to synthetic biology to fuels

(2008) Sung Kuk Lee et al.   CURRENT OPINION IN BIOTECHNOLOGY

Modelling biological modularity with CellML

(2008) M.T. Cooling et al.   IET Systems Biology

Distributed robustness in cellular networks: insights from synthetic evolved circuits

(2008) J. Macia et al.   Journal of the Royal Society Interface