Prediction of hydrogen and carbon chemical shifts from RNA using database mining and support vector regression

NMR proton chemical shift prediction of C·C mismatches in B-DNA

(2015) Kui Sang Ng et al.   JOURNAL OF MAGNETIC RESONANCE

Strategy for automated NMR resonance assignment of RNA: application to 48-nucleotide K10

(2014) Barbara Krähenbühl et al.   JOURNAL OF BIOMOLECULAR NMR

A Simple and Fast Approach for Predicting 1H and 13C Chemical Shifts: Toward Chemical Shift-Guided Simulations of RNA

(2014) Aaron T. Frank et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Structure determination of noncanonical RNA motifs guided by 1H NMR chemical shifts

(2014) Parin Sripakdeevong et al.   NATURE METHODS

Nucleic acid helix structure determination from NMR proton chemical shifts

(2013) Ramon M. van der Werf et al.   JOURNAL OF BIOMOLECULAR NMR

NMR proton chemical shift prediction of T·T mismatches in B-DNA duplexes

(2013) Chun Kit Kwok et al.   JOURNAL OF MAGNETIC RESONANCE

Analysis of the Contributions of Ring Current and Electric Field Effects to the Chemical Shifts of RNA Bases

(2013) Aleksandr B. Sahakyan et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Prediction of RNA 1H and 13C Chemical Shifts: A Structure Based Approach

(2013) Aaron T. Frank et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Automated and assisted RNA resonance assignment using NMR chemical shift statistics

(2013) Thomas Aeschbacher et al.   NUCLEIC ACIDS RESEARCH

Chemical Shifts in Nucleic Acids Studied by Density Functional Theory Calculations and Comparison with Experiment

(2012) Judith M. Fonville et al.   CHEMISTRY-A EUROPEAN JOURNAL

Database proton NMR chemical shifts for RNA signal assignment and validation

(2012) Shawn Barton et al.   JOURNAL OF BIOMOLECULAR NMR

A procedure to validate and correct the 13C chemical shift calibration of RNA datasets

(2012) Thomas Aeschbacher et al.   JOURNAL OF BIOMOLECULAR NMR

Characterizing RNA dynamics at atomic resolution using solution-state NMR spectroscopy

(2011) Jameson R Bothe et al.   NATURE METHODS

A probabilistic approach for validating protein NMR chemical shift assignments

(2010) Bowei Wang et al.   JOURNAL OF BIOMOLECULAR NMR

SPARTA+: a modest improvement in empirical NMR chemical shift prediction by means of an artificial neural network

(2010) Yang Shen et al.   JOURNAL OF BIOMOLECULAR NMR

Major groove width variations in RNA structures determined by NMR and impact of 13C residual chemical shift anisotropy and 1H–13C residual dipolar coupling on refinement

(2010) Blanton S. Tolbert et al.   JOURNAL OF BIOMOLECULAR NMR

The RNA backbone plays a crucial role in mediating the intrinsic stability of the GpU dinucleotide platform and the GpUpA/GpA miniduplex

(2010) Xiang-Jun Lu et al.   NUCLEIC ACIDS RESEARCH

Evolution and Functions of Long Noncoding RNAs

(2009) Chris P. Ponting et al.   CELL

Isolation of an active step I spliceosome and composition of its RNP core

(2008) Sergey Bessonov et al.   NATURE

3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures

(2008) Xiang-Jun Lu et al.   Nature Protocols

A structural understanding of the dynamic ribosome machine

(2008) Thomas A. Steitz   NATURE REVIEWS MOLECULAR CELL BIOLOGY