Characterizing RNA dynamics at atomic resolution using solution-state NMR spectroscopy

Enhanced Base-Pair Opening in the Adenine Tract of a RNA Double Helix

(2011) Yuegao Huang et al.   BIOCHEMISTRY

Elucidating slow binding kinetics of a protein without observable bound resonances by longitudinal relaxation NMR spectroscopy

(2011) Kenji Sugase   JOURNAL OF BIOMOLECULAR NMR

Transient Hoogsteen base pairs in canonical duplex DNA

(2011) Evgenia N. Nikolova et al.   NATURE

Discovery of selective bioactive small molecules by targeting an RNA dynamic ensemble

(2011) Andrew C Stelzer et al.   Nature Chemical Biology

Probing RNA dynamics via longitudinal exchange and CPMG relaxation dispersion NMR spectroscopy using a sensitive 13C-methyl label

(2011) Karin Kloiber et al.   NUCLEIC ACIDS RESEARCH

Performance of Molecular Mechanics Force Fields for RNA Simulations: Stability of UUCG and GNRA Hairpins

(2010) Pavel Banáš et al.   Journal of Chemical Theory and Computation

Rapid global structure determination of large RNA and RNA complexes using NMR and small-angle X-ray scattering

(2010) Yun-Xing Wang et al.   METHODS

Direct observation of the temperature-induced melting process of the Salmonella fourU RNA thermometer at base-pair resolution

(2010) Jörg Rinnenthal et al.   NUCLEIC ACIDS RESEARCH

Real-time multidimensional NMR follows RNA folding with second resolution

(2010) M.-K. Lee et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Unstable Part of the Apical Stem of Duck Hepatitis B Virus Epsilon Shows Enhanced Base Pair Opening but Not Pico- to Nanosecond Dynamics and Is Essential for Reverse Transcriptase Binding

(2009) Kirsten A. M. Ampt et al.   BIOCHEMISTRY

The Dynamic Landscapes of RNA Architecture

(2009) José Almeida Cruz et al.   CELL

RNA and Disease

(2009) Thomas A. Cooper et al.   CELL

Measurement of signs of chemical shift differences between ground and excited protein states: a comparison between H(S/M)QC and R 1ρ methods

(2009) Renate Auer et al.   JOURNAL OF BIOMOLECULAR NMR

RNA phosphodiester backbone dynamics of a perdeuterated cUUCGg tetraloop RNA from phosphorus-31 NMR relaxation analysis

(2009) Jörg Rinnenthal et al.   JOURNAL OF BIOMOLECULAR NMR

Minimum-Energy Path for a U6 RNA Conformational Change Involving Protonation, Base-Pair Rearrangement and Base Flipping

(2009) Vincenzo Venditti et al.   JOURNAL OF MOLECULAR BIOLOGY

Approximate Reconstruction of Continuous Spatially Complex Domain Motions by Multialignment NMR Residual Dipolar Couplings

(2009) Charles K. Fisher et al.   JOURNAL OF PHYSICAL CHEMISTRY B

NMR Chemical Exchange as a Probe for Ligand-Binding Kinetics in a Theophylline-Binding RNA Aptamer

(2009) Michael P. Latham et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Extending the Range of Microsecond-to-Millisecond Chemical Exchange Detected in Labeled and Unlabeled Nucleic Acids by Selective Carbon R1ρNMR Spectroscopy

(2009) Alexandar L. Hansen et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

The role of dynamic conformational ensembles in biomolecular recognition

(2009) David D Boehr et al.   Nature Chemical Biology

How binding of small molecule and peptide ligands to HIV-1 TAR alters the RNA motional landscape

(2009) Michael F. Bardaro et al.   NUCLEIC ACIDS RESEARCH

Constructing RNA dynamical ensembles by combining MD and motionally decoupled NMR RDCs: new insights into RNA dynamics and adaptive ligand recognition

(2009) Aaron T. Frank et al.   NUCLEIC ACIDS RESEARCH

Probing Invisible, Low-Populated States of Protein Molecules by Relaxation Dispersion NMR Spectroscopy: An Application to Protein Folding

(2008) Dmitry M. Korzhnev et al.   ACCOUNTS OF CHEMICAL RESEARCH

Characterizing Complex Dynamics in the Transactivation Response Element Apical Loop and Motional Correlations with the Bulge by NMR, Molecular Dynamics, and Mutagenesis

(2008) Elizabeth A. Dethoff et al.   BIOPHYSICAL JOURNAL

RNA dynamics: it is about time

(2008) Hashim M Al-Hashimi et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

Using relaxation dispersion NMR spectroscopy to determine structures of excited, invisible protein states

(2008) D. Flemming Hansen et al.   JOURNAL OF BIOMOLECULAR NMR

Ultrahigh Resolution Characterization of Domain Motions and Correlations by Multialignment and Multireference Residual Dipolar Coupling NMR

(2008) Charles K. Fisher et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Extensive Backbone Dynamics in the GCAA RNA Tetraloop Analyzed Using13C NMR Spin Relaxation and Specific Isotope Labeling

(2008) James E. Johnson et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Solid-State Deuterium NMR Studies Reveal μs-ns Motions in the HIV-1 Transactivation Response RNA Recognition Site

(2008) Greg L. Olsen et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Changes in Dynamics of SRE-RNA on Binding to the VTS1p-SAM Domain Studied by13C NMR Relaxation

(2008) Florian C. Oberstrass et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Strong Correlation between SHAPE Chemistry and the Generalized NMR Order Parameter (S2) in RNA

(2008) Costin M. Gherghe et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Extending the NMR spatial resolution limit for RNA by motional couplings

(2008) Qi Zhang et al.   NATURE METHODS

NMR and MD studies of the temperature-dependent dynamics of RNA YNMG-tetraloops

(2008) Jan Ferner et al.   NUCLEIC ACIDS RESEARCH