Comparative transcriptomic analysis of the heat stress response in the filamentous fungus Metarhizium anisopliae using RNA-Seq

A novel link between autophagy and the ubiquitin-proteasome system

(2014) Viktor I. Korolchuk et al.   Autophagy

Self-eating to grow and kill: autophagy in filamentous ascomycetes

(2013) Oliver Voigt et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Autophagy promotes survival in aging submerged cultures of the filamentous fungus Aspergillus niger

(2013) Benjamin M. Nitsche et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Overexpression of a Metarhizium robertsii HSP25 gene increases thermotolerance and survival in soil

(2013) Xinggang Liao et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Linkage of autophagy to fungal development, lipid storage and virulence inMetarhizium robertsii

(2013) Zhibing Duan et al.   Autophagy

Genome-wide transcriptional response of Trichoderma reesei to lignocellulose using RNA sequencing and comparison with Aspergillus niger

(2013) Laure Ries et al.   BMC GENOMICS

Proteins differentially expressed in conidia and mycelia of the entomopathogenic fungus Metarhizium anisopliae sensu stricto

(2013) Yubin Su et al.   CANADIAN JOURNAL OF MICROBIOLOGY

Coordination of Translational Control and Protein Homeostasis during Severe Heat Stress

(2013) Valeria Cherkasov et al.   CURRENT BIOLOGY

Transcriptomic profiling of Aspergillus flavus in response to 5-azacytidine

(2013) Jian-Qing Lin et al.   FUNGAL GENETICS AND BIOLOGY

The diverse applications of RNA-seq for functional genomic studies inAspergillus fumigatus

(2012) Antonis Rokas et al.   Annals of the New York Academy of Sciences

In-Depth Analysis of the Magnaporthe oryzae Conidial Proteome

(2012) Emine Gokce et al.   JOURNAL OF PROTEOME RESEARCH

A comprehensive comparison of RNA-Seq-based transcriptome analysis from reads to differential gene expression and cross-comparison with microarrays: a case study in Saccharomyces cerevisiae

(2012) Intawat Nookaew et al.   NUCLEIC ACIDS RESEARCH

Genome-wide Transcriptional Profiling of Appressorium Development by the Rice Blast Fungus Magnaporthe oryzae

(2012) Darren M. Soanes et al.   PLoS Pathogens

Contribution of the gas1 Gene of the Entomopathogenic Fungus Beauveria bassiana, Encoding a Putative Glycosylphosphatidylinositol-Anchored β-1,3-Glucanosyltransferase, to Conidial Thermotolerance and Virulence

(2011) Shizhu Zhang et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

A conidial protein (CP15) of Beauveria bassiana contributes to the conidial tolerance of the entomopathogenic fungus to thermal and oxidative stresses

(2011) Sheng-Hua Ying et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

RNA-Seq improves annotation of protein-coding genes in the cucumber genome

(2011) Zhen Li et al.   BMC GENOMICS

Genetically altering the expression of neutral trehalase gene affects conidiospore thermotolerance of the entomopathogenic fungus Metarhizium acridum

(2011) Yajun Leng et al.   BMC MICROBIOLOGY

Perspectives on the potential of entomopathogenic fungi in biological control of ticks

(2011) Éverton K.K. Fernandes et al.   EXPERIMENTAL PARASITOLOGY

Ubiquitin–proteasome pathway and cellular responses to oxidative stress

(2011) Fu Shang et al.   FREE RADICAL BIOLOGY AND MEDICINE

Molecular mechanism and physiological functions of clathrin-mediated endocytosis

(2011) Harvey T. McMahon et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Genome Sequencing and Comparative Transcriptomics of the Model Entomopathogenic Fungi Metarhizium anisopliae and M. acridum

(2011) Qiang Gao et al.   PLoS Genetics

From RNA-seq reads to differential expression results

(2011) Alicia Oshlack et al.   GENOME BIOLOGY

Integrative analysis of the heat shock response in Aspergillus fumigatus

(2010) Daniela Albrecht et al.   BMC GENOMICS

A proteomic approach to identifying proteins differentially expressed in conidia and mycelium of the entomopathogenic fungus Metarhizium acridum

(2010) Bruno H.R. Barros et al.   Fungal Biology

Role of Trehalose Biosynthesis in Aspergillus fumigatus Development, Stress Response, and Virulence

(2010) N. Al-Bader et al.   INFECTION AND IMMUNITY

Production of thermotolerant entomopathogenic fungal conidia on millet grain

(2010) Jae Su Kim et al.   JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY

Genetic engineering of fungal biocontrol agents to achieve greater efficacy against insect pests

(2009) Raymond J. St. Leger et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

SOAP2: an improved ultrafast tool for short read alignment

(2009) R. Li et al.   BIOINFORMATICS

Transcriptomic analysis of the exit from dormancy of Aspergillus fumigatus conidia

(2008) Claude Lamarre et al.   BMC GENOMICS

Autophagy in filamentous fungi

(2008) J POLLACK et al.   FUNGAL GENETICS AND BIOLOGY

Mechanisms and functions of endocytosis: Figure 1.

(2008) Marta Miaczynska et al.   JOURNAL OF CELL BIOLOGY

Mapping and quantifying mammalian transcriptomes by RNA-Seq

(2008) Ali Mortazavi et al.   NATURE METHODS

RNA-Seq: a revolutionary tool for transcriptomics

(2008) Zhong Wang et al.   NATURE REVIEWS GENETICS

Effects of physical and nutritional stress conditions during mycelial growth on conidial germination speed, adhesion to host cuticle, and virulence of Metarhizium anisopliae, an entomopathogenic fungus

(2008) Drauzio E.N. Rangel et al.