Squaring up to DNA: pentapeptide repeat proteins and DNA mimicry

Fluoroquinolone-Gyrase-DNA Complexes

(2014) Arkady Mustaev et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

(2013) Koichiro Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Neisseria conserved hypothetical protein DMP12 is a DNA mimic that binds to histone-like HU protein

(2013) Hao-Ching Wang et al.   NUCLEIC ACIDS RESEARCH

Staphylococcus aureus protein SAUGI acts as a uracil-DNA glycosylase inhibitor

(2013) H.-C. Wang et al.   NUCLEIC ACIDS RESEARCH

Structural insight into negative DNA supercoiling by DNA gyrase, a bacterial type 2A DNA topoisomerase

(2013) Julie Papillon et al.   NUCLEIC ACIDS RESEARCH

Structure of an ‘open’ clamp type II topoisomerase-DNA complex provides a mechanism for DNA capture and transport

(2013) Ivan Laponogov et al.   NUCLEIC ACIDS RESEARCH

Neisseria conserved protein DMP19 is a DNA mimic protein that prevents DNA binding to a hypothetical nitrogen-response transcription factor

(2012) Hao-Ching Wang et al.   NUCLEIC ACIDS RESEARCH

Mycobacterium fluoroquinolone resistance protein B, a novel small GTPase, is involved in the regulation of DNA gyrase and drug resistance

(2012) Jun Tao et al.   NUCLEIC ACIDS RESEARCH

Pentapeptide-repeat proteins that act as topoisomerase poison resistance factors have a common dimer interface

(2011) Matthew W. Vetting et al.   Acta Crystallographica Section F-Structural Biology and Crystallization Communications

Exploiting bacterial DNA gyrase as a drug target: current state and perspectives

(2011) Frédéric Collin et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Structure of QnrB1, a Plasmid-mediated Fluoroquinolone Resistance Factor

(2011) Matthew W. Vetting et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Two Modes of Binding of DinI to RecA Filament Provide a New Insight into the Regulation of SOS Response by DinI Protein

(2011) Vitold E. Galkin et al.   JOURNAL OF MOLECULAR BIOLOGY

Novel dimeric structure of phage ϕ29-encoded protein p56: insights into uracil-DNA glycosylase inhibition

(2011) Juan Luis Asensio et al.   NUCLEIC ACIDS RESEARCH

Structural insights into quinolone antibiotic resistance mediated by pentapeptide repeat proteins: conserved surface loops direct the activity of a Qnr protein from a Gram-negative bacterium

(2011) Xiaoli Xiong et al.   NUCLEIC ACIDS RESEARCH

tRNA mimicry in translation termination and beyond

(2011) Yoshikazu Nakamura et al.   Wiley Interdisciplinary Reviews-RNA

Structural and Biochemical Analysis of the Pentapeptide Repeat ProteinEfsQnr, a Potent DNA Gyrase Inhibitor

(2010) Subray S. Hegde et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Plasmid-mediated quinolone resistance: an update

(2010) José Manuel Rodríguez-Martínez et al.   JOURNAL OF INFECTION AND CHEMOTHERAPY

Type IIA topoisomerase inhibition by a new class of antibacterial agents

(2010) Benjamin D. Bax et al.   NATURE

I-TASSER: a unified platform for automated protein structure and function prediction

(2010) Ambrish Roy et al.   Nature Protocols

Structural basis of quinolone inhibition of type IIA topoisomerases and target-mediated resistance

(2010) Alexandre Wohlkonig et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

A bacterial antirepressor with SH3 domain topology mimics operator DNA in sequestering the repressor DNA recognition helix

(2010) Esther León et al.   NUCLEIC ACIDS RESEARCH

Structural Basis of Gate-DNA Breakage and Resealing by Type II Topoisomerases

(2010) Ivan Laponogov et al.   PLoS One

A mutational analysis and molecular dynamics simulation of quinolone resistance proteins QnrA1 and QnrC from Proteus mirabilis

(2010) Qinglan Guo et al.   BMC STRUCTURAL BIOLOGY

Crystallization of a pentapeptide-repeat protein by reductive cyclic pentylation of free amines with glutaraldehyde

(2009) Matthew W. Vetting et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

New Plasmid-Mediated Quinolone Resistance Gene, qnrC, Found in a Clinical Isolate of Proteus mirabilis

(2009) M. Wang et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Modes of p53 Regulation

(2009) Jan-Philipp Kruse et al.   CELL

Plasmid-Mediated Quinolone Resistance: a Multifaceted Threat

(2009) J. Strahilevitz et al.   CLINICAL MICROBIOLOGY REVIEWS

Structural insight into the quinolone–DNA cleavage complex of type IIA topoisomerases

(2009) Ivan Laponogov et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Extensive DNA mimicry by the ArdA anti-restriction protein and its role in the spread of antibiotic resistance

(2009) Stephen A. McMahon et al.   NUCLEIC ACIDS RESEARCH

qnr Gene Nomenclature

(2008) G. Jacoby et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

qnrD, a Novel Gene Conferring Transferable Quinolone Resistance in Salmonella enterica Serovar Kentucky and Bovismorbificans Strains of Human Origin

(2008) L. M. Cavaco et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

I-TASSER server for protein 3D structure prediction

(2008) Yang Zhang   BMC BIOINFORMATICS

Identification of Meningococcal Genes Necessary for Colonization of Human Upper Airway Tissue

(2008) R. M. Exley et al.   INFECTION AND IMMUNITY

The Pentapeptide Repeat Proteins MfpAMt and QnrB4 Exhibit Opposite Effects on DNA Gyrase Catalytic Reactions and on the Ternary Gyrase-DNA-Quinolone Complex

(2008) A. Merens et al.   JOURNAL OF BACTERIOLOGY

The 2Å resolution crystal structure of HetL, a pentapeptide repeat protein involved in regulation of heterocyst differentiation in the cyanobacterium Nostoc sp. strain PCC 7120

(2008) S NI et al.   JOURNAL OF STRUCTURAL BIOLOGY

White spot syndrome virus protein ICP11: A histone-binding DNA mimic that disrupts nucleosome assembly

(2008) H.-C. Wang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Insights into the structural variation between pentapeptide repeat proteins—Crystal structure of Rfr23 from Cyanothece 51142

(2007) Garry W. Buchko et al.   JOURNAL OF STRUCTURAL BIOLOGY

Light-induced carotenogenesis in Myxococcus xanthus: evidence that CarS acts as an anti-repressor of CarA

(2003) David E. Whitworth et al.   MOLECULAR MICROBIOLOGY