Microbial response to simulated global change is phylogenetically conserved and linked with functional potential

Nitrogen addition, not initial phylogenetic diversity, increases litter decomposition by fungal communities

(2015) Anthony S. Amend et al.   Frontiers in Microbiology

Genomic Potential for Polysaccharide Deconstruction in Bacteria

(2014) Renaud Berlemont et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Evolutionary histories of soil fungi are reflected in their large-scale biogeography

(2014) Kathleen K. Treseder et al.   ECOLOGY LETTERS

The emergence and promise of functional biogeography

(2014) C. Violle et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A Linear-Time Algorithm for Gaussian and Non-Gaussian Trait Evolution Models

(2014) Lam si Tung Ho et al.   SYSTEMATIC BIOLOGY

Microbial ecology of denitrification in biological wastewater treatment

(2014) Huijie Lu et al.   WATER RESEARCH

Cellulolytic potential under environmental changes in microbial communities from grassland litter

(2014) Renaud Berlemont et al.   Frontiers in Microbiology

Climate change alters ecological strategies of soil bacteria

(2013) Sarah E. Evans et al.   ECOLOGY LETTERS

Microdiversity of extracellular enzyme genes among sequenced prokaryotic genomes

(2013) Amy E Zimmerman et al.   ISME Journal

Responses of soil bacterial and fungal communities to extreme desiccation and rewetting

(2013) Romain L Barnard et al.   ISME Journal

Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences

(2013) Morgan G I Langille et al.   NATURE BIOTECHNOLOGY

Functional traits, the phylogeny of function, and ecosystem service vulnerability

(2013) Sandra Díaz et al.   Ecology and Evolution

Genomic and Physiological Characterization of the Chromate-Reducing, Aquifer-Derived Firmicute Pelosinus sp. Strain HCF1

(2012) Harry R. Beller et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Phylogenetic Distribution of Potential Cellulases in Bacteria

(2012) Renaud Berlemont et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Mapping the niche space of soil microorganisms using taxonomy and traits

(2012) Jay T. Lennon et al.   ECOLOGY

Microbial abundance and composition influence litter decomposition response to environmental change

(2012) Steven D. Allison et al.   ECOLOGY

A trait-based approach for modelling microbial litter decomposition

(2012) S. D. Allison   ECOLOGY LETTERS

Phylogenetic diversity and the functioning of ecosystems

(2012) Diane S. Srivastava et al.   ECOLOGY LETTERS

Phylogenetic conservatism of functional traits in microorganisms

(2012) Adam C Martiny et al.   ISME Journal

Rainfall-induced carbon dioxide pulses result from sequential resuscitation of phylogenetically clustered microbial groups

(2012) S. A. Placella et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

Functional and phylogenetic diversity as predictors of biodiversity–ecosystem-function relationships

(2011) Dan F. B. Flynn et al.   ECOLOGY

Horizontal gene transfer in fungi

(2011) David A. Fitzpatrick   FEMS MICROBIOLOGY LETTERS

Coral-associated marine fungi form novel lineages and heterogeneous assemblages

(2011) Anthony S Amend et al.   ISME Journal

Picante: R tools for integrating phylogenies and ecology

(2010) S. W. Kembel et al.   BIOINFORMATICS

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Ecological and life-history traits predict bee species responses to environmental disturbances

(2010) Neal M. Williams et al.   BIOLOGICAL CONSERVATION

Accessing the SEED Genome Databases via Web Services API: Tools for Programmers

(2010) Terry Disz et al.   BMC BIOINFORMATICS

Functional diversity in resource use by fungi

(2010) Krista L. McGuire et al.   ECOLOGY

Communities contain closely related species during ecosystem disturbance

(2010) Matthew R. Helmus et al.   ECOLOGY LETTERS

Microbial communities acclimate to recurring changes in soil redox potential status

(2010) Kristen M. DeAngelis et al.   ENVIRONMENTAL MICROBIOLOGY

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

The ecological coherence of high bacterial taxonomic ranks

(2010) Laurent Philippot et al.   NATURE REVIEWS MICROBIOLOGY

The importance of phylogeny to the study of phenological response to global climate change

(2010) C. C. Davis et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Differential expression analysis for sequence count data

(2010) Simon Anders et al.   GENOME BIOLOGY

PhyloPars: estimation of missing parameter values using phylogeny

(2009) Jorn Bruggeman et al.   NUCLEIC ACIDS RESEARCH

Using Phylogenetic, Functional and Trait Diversity to Understand Patterns of Plant Community Productivity

(2009) Marc W. Cadotte et al.   PLoS One

Phylocom: software for the analysis of phylogenetic community structure and trait evolution

(2008) Campbell O. Webb et al.   BIOINFORMATICS

Scaling environmental change through the community-level: a trait-based response-and-effect framework for plants

(2008) KATHARINE N. SUDING et al.   GLOBAL CHANGE BIOLOGY

Resistance, resilience, and redundancy in microbial communities

(2008) S. D. Allison et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Evolutionary history and the effect of biodiversity on plant productivity

(2008) M. W. Cadotte et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Phylogenetic patterns of species loss in Thoreau's woods are driven by climate change

(2008) C. G. Willis et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A Rapid Bootstrap Algorithm for the RAxML Web Servers

(2008) Alexandros Stamatakis et al.   SYSTEMATIC BIOLOGY