Stochastic distribution of small soil eukaryotes resulting from high dispersal and drift in a local environment

DNA metabarcoding and the cytochrome c oxidase subunit I marker: not a perfect match

(2014) B. E. Deagle et al.   Biology Letters

Spatial scale resolves the niche versus neutral theory debate

(2014) Jonathan M. Chase   JOURNAL OF VEGETATION SCIENCE

Assessing the relative importance of neutral stochasticity in ecological communities

(2014) Mark Vellend et al.   OIKOS

Endemism and functional convergence across the North American soil mycobiome

(2014) J. M. Talbot et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Global diversity and geography of soil fungi

(2014) L. Tedersoo et al.   SCIENCE

Mistaking geography for biology: inferring processes from species distributions

(2014) Dan. L. Warren et al.   TRENDS IN ECOLOGY & EVOLUTION

Is dispersal neutral?

(2014) Winsor H. Lowe et al.   TRENDS IN ECOLOGY & EVOLUTION

Quantifying community assembly processes and identifying features that impose them

(2013) James C Stegen et al.   ISME Journal

Phylogenetic beta diversity in bacterial assemblages across ecosystems: deterministic versus stochastic processes

(2013) Jianjun Wang et al.   ISME Journal

The distance decay of similarity in communities of ectomycorrhizal fungi in different ecosystems and scales

(2013) Mohammad Bahram et al.   JOURNAL OF ECOLOGY

Lineages of ectomycorrhizal fungi revisited: Foraging strategies and novel lineages revealed by sequences from belowground

(2013) Leho Tedersoo et al.   Fungal Biology Reviews

CD-HIT: accelerated for clustering the next-generation sequencing data

(2012) Limin Fu et al.   BIOINFORMATICS

Ecological determinism increases with organism size

(2012) Vinicius F. Farjalla et al.   ECOLOGY

Body size and dispersal mode as key traits determining metacommunity structure of aquatic organisms

(2012) T. Bie et al.   ECOLOGY LETTERS

Current measures for distance decay in similarity of species composition are influenced by study extent and grain size

(2012) Manuel Jonas Steinbauer et al.   GLOBAL ECOLOGY AND BIOGEOGRAPHY

Global biogeography of highly diverse protistan communities in soil

(2012) Scott T Bates et al.   ISME Journal

Fast, accurate error-correction of amplicon pyrosequences using Acacia

(2012) Lauren Bragg et al.   NATURE METHODS

Spatial patterns of soil pathogens in declining Mediterranean forests: implications for tree species regeneration

(2012) Lorena Gómez-Aparicio et al.   NEW PHYTOLOGIST

Enzymatic activities and stable isotope patterns of ectomycorrhizal fungi in relation to phylogeny and exploration types in an afrotropical rain forest

(2012) Leho Tedersoo et al.   NEW PHYTOLOGIST

Cryptic Diversity in the Ubiquist Species Parisotoma notabilis (Collembola, Isotomidae): A Long-Used Chimeric Species?

(2012) David Porco et al.   PLoS One

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

Population genetics of ectomycorrhizal fungi: from current knowledge to emerging directions

(2011) Greg W. Douhan et al.   Fungal Biology

Distance decay of similarity in freshwater communities: do macro- and microorganisms follow the same rules?

(2011) Anna Astorga et al.   GLOBAL ECOLOGY AND BIOGEOGRAPHY

Environmental and spatial controls of biotic assemblages in a discrete semi-terrestrial habitat: comparison of organisms with different dispersal abilities sampled in the same plots

(2011) Michal Hájek et al.   JOURNAL OF BIOGEOGRAPHY

Soil rotifer communities are extremely diverse globally but spatially autocorrelated locally

(2011) M. S. Robeson et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Drivers of bacterial  -diversity depend on spatial scale

(2011) J. B. H. Martiny et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Molecular study of worldwide distribution and diversity of soil animals

(2011) T. Wu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Seasonal dynamics of soil respiration and N mineralization in chronically warmed and fertilized soils

(2011) A. R. Contosta et al.   Ecosphere

Small-scale distribution of extracellular enzymes, fungal, and bacterial biomass in Quercus petraea forest topsoil

(2010) Petr Baldrian et al.   BIOLOGY AND FERTILITY OF SOILS

A single European aspen (Populus tremula) tree individual may potentially harbour dozens of Cenococcum geophilum ITS genotypes and hundreds of species of ectomycorrhizal fungi

(2010) Mohammad Bahram et al.   FEMS MICROBIOLOGY ECOLOGY

No biogeographical pattern for a root-associated fungal species complex

(2010) Valentin Queloz et al.   GLOBAL ECOLOGY AND BIOGEOGRAPHY

Soil bacterial and fungal communities across a pH gradient in an arable soil

(2010) Johannes Rousk et al.   ISME Journal

COI gene and ecological data suggest size-dependent high dispersal and low intra-specific diversity in free-living terrestrial protists (Euglyphida: Assulina)

(2010) Enrique Lara et al.   JOURNAL OF BIOGEOGRAPHY

454 Pyrosequencing and Sanger sequencing of tropical mycorrhizal fungi provide similar results but reveal substantial methodological biases

(2010) Leho Tedersoo et al.   NEW PHYTOLOGIST

Effects of soil properties and management on the activity of soil organic matter transforming enzymes and the quantification of soil-bound and free activity

(2010) Martina Štursová et al.   PLANT AND SOIL

Conceptual Synthesis in Community Ecology

(2010) Mark Vellend   QUARTERLY REVIEW OF BIOLOGY

Blurred boundaries: lifestyle lessons from ectomycorrhizal fungal genomes

(2010) Jonathan M. Plett et al.   TRENDS IN GENETICS

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Pyrosequencing-Based Assessment of Soil pH as a Predictor of Soil Bacterial Community Structure at the Continental Scale

(2009) C. L. Lauber et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Partitioning beta diversity in a subtropical broad-leaved forest of China

(2009) Pierre Legendre et al.   ECOLOGY

Partitioning the turnover and nestedness components of beta diversity

(2009) Andrés Baselga   GLOBAL ECOLOGY AND BIOGEOGRAPHY

Relative roles of niche and neutral processes in structuring a soil microbial community

(2009) Alex J Dumbrell et al.   ISME Journal

A general framework for the distance-decay of similarity in ecological communities

(2008) Hélène Morlon et al.   ECOLOGY LETTERS

Preferential allocation to beneficial symbiont with spatial structure maintains mycorrhizal mutualism

(2008) James D. Bever et al.   ECOLOGY LETTERS

A Rapid Bootstrap Algorithm for the RAxML Web Servers

(2008) Alexandros Stamatakis et al.   SYSTEMATIC BIOLOGY