Genomic Insights into the Evolutionary Origin of Xanthomonas axonopodis pv. citri and Its Ecological Relatives

Evolutionary pathway to increased virulence and epidemic group A Streptococcus disease derived from 3,615 genome sequences

(2014) W. Nasser et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Comparative genomic and transcriptome analyses of pathotypes of Xanthomonas citri subsp. citri provide insights into mechanisms of bacterial virulence and host range

(2013) Neha Jalan et al.   BMC GENOMICS

Genome mining reveals the genus Xanthomonas to be a promising reservoir for new bioactive non-ribosomally synthesized peptides

(2013) Monique Royer et al.   BMC GENOMICS

MLST revisited: the gene-by-gene approach to bacterial genomics

(2013) Martin C. J. Maiden et al.   NATURE REVIEWS MICROBIOLOGY

Evolutionary History of the Plant Pathogenic Bacterium Xanthomonas axonopodis

(2013) Nadia Mhedbi-Hajri et al.   PLoS One

A Hybrid NRPS-PKS Gene Cluster Related to the Bleomycin Family of Antitumor Antibiotics in Alteromonas macleodii Strains

(2013) Carolina Megumi Mizuno et al.   PLoS One

Genomic Survey of Pathogenicity Determinants and VNTR Markers in the Cassava Bacterial Pathogen Xanthomonas axonopodis pv. Manihotis Strain CIO151

(2013) Mario L. Arrieta-Ortiz et al.   PLoS One

Genomic insights into strategies used by Xanthomonas albilineans with its reduced artillery to spread within sugarcane xylem vessels

(2012) Isabelle Pieretti et al.   BMC GENOMICS

A novel pathovar of Xanthomonas axonopodis causes gumming of Guggal (Commiphora wightii)

(2012) Jatindra Nath Samanta et al.   EUROPEAN JOURNAL OF PLANT PATHOLOGY

Genome Sequence of Xanthomonas citri pv. mangiferaeindicae Strain LMG 941

(2012) S. Midha et al.   JOURNAL OF BACTERIOLOGY

Genome Sequence of Xanthomonas axonopodis pv. punicae Strain LMG 859

(2012) V. Sharma et al.   JOURNAL OF BACTERIOLOGY

Structural Basis of the Interaction of MbtH-like Proteins, Putative Regulators of Nonribosomal Peptide Biosynthesis, with Adenylating Enzymes

(2012) Dominik A. Herbst et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Cryptic Polyketide Synthase Genes in Non-Pathogenic Clostridium SPP

(2012) Swantje Behnken et al.   PLoS One

The Natural Product Domain Seeker NaPDoS: A Phylogeny Based Bioinformatic Tool to Classify Secondary Metabolite Gene Diversity

(2012) Nadine Ziemert et al.   PLoS One

PGAP: pan-genomes analysis pipeline

(2011) Yongbing Zhao et al.   BIOINFORMATICS

BLAST Ring Image Generator (BRIG): simple prokaryote genome comparisons

(2011) Nabil-Fareed Alikhan et al.   BMC GENOMICS

antiSMASH: rapid identification, annotation and analysis of secondary metabolite biosynthesis gene clusters in bacterial and fungal genome sequences

(2011) Marnix H. Medema et al.   NUCLEIC ACIDS RESEARCH

Detection ofXanthomonas axonopodispv.punicaecausing bacterial blight on pomegranate in South Africa

(2010) Y. Petersen et al.   AUSTRALASIAN PLANT PATHOLOGY

CRISPR interference: RNA-directed adaptive immunity in bacteria and archaea

(2010) Luciano A. Marraffini et al.   NATURE REVIEWS GENETICS

SBSPKS: structure based sequence analysis of polyketide synthases

(2010) Swadha Anand et al.   NUCLEIC ACIDS RESEARCH

Analysis of CRISPR system function in plant pathogenXanthomonas oryzae

(2009) Ekaterina Semenova et al.   FEMS MICROBIOLOGY LETTERS

Polyphasic characterization of xanthomonads pathogenic to members of the Anacardiaceae and their relatedness to species of Xanthomonas

(2009) N. Ah-You et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Phylogenetic structure of Xanthomonas determined by comparison of gyrB sequences

(2009) N. Parkinson et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Diversification of the gut symbiont Lactobacillus reuteri as a result of host-driven evolution

(2009) Phaik Lyn Oh et al.   ISME Journal

Shifting the genomic gold standard for the prokaryotic species definition

(2009) Michael Richter et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The new IS1595 family, its relation to IS1 and the frontier between insertion sequences and transposons

(2009) Patricia Siguier et al.   RESEARCH IN MICROBIOLOGY

Genome sequence and rapid evolution of the rice pathogen Xanthomonas oryzae pv. oryzae PXO99A

(2008) Steven L Salzberg et al.   BMC GENOMICS

The RAST Server: Rapid Annotations using Subsystems Technology

(2008) Ramy K Aziz et al.   BMC GENOMICS

MEGA: A biologist-centric software for evolutionary analysis of DNA and protein sequences

(2008) S. Kumar et al.   BRIEFINGS IN BIOINFORMATICS

A simple, fast, and accurate method of phylogenomic inference

(2008) Martin Wu et al.   GENOME BIOLOGY