Unveiling of the Diversity of Prasinoviruses (Phycodnaviridae) in Marine Samples by Using High-Throughput Sequencing Analyses of PCR-Amplified DNA Polymerase and Major Capsid Protein Genes

Exploring nucleo-cytoplasmic large DNA viruses in Tara Oceans microbial metagenomes

(2013) Pascal Hingamp et al.   ISME Journal

GENETIC EXCHANGES OF INTEINS BETWEENPRASINOVIRUSES(PHYCODNAVIRIDAE)

(2012) Camille Clerissi et al.   EVOLUTION

Prasinoviruses of the Marine Green Alga Ostreococcus tauri Are Mainly Species Specific

(2012) Camille Clerissi et al.   JOURNAL OF VIROLOGY

jModelTest 2: more models, new heuristics and parallel computing

(2012) Diego Darriba et al.   NATURE METHODS

Phylogenetic analysis of Ostreococcus virus sequences from the Patagonian Coast

(2012) Julieta M. Manrique et al.   VIRUS GENES

Removing Noise From Pyrosequenced Amplicons

(2011) Christopher Quince et al.   BMC BIOINFORMATICS

Acquisition and maintenance of resistance to viruses in eukaryotic phytoplankton populations

(2011) Rozenn Thomas et al.   ENVIRONMENTAL MICROBIOLOGY

Phylodynamics and movement of Phycodnaviruses among aquatic environments

(2011) Manuela V Gimenes et al.   ISME Journal

Genome Sequence of Ostreococcus tauri Virus OtV-2 Throws Light on the Role of Picoeukaryote Niche Separation in the Ocean

(2011) K. D. Weynberg et al.   JOURNAL OF VIROLOGY

Novel phycodnavirus genes amplified from Canadian freshwater environments

(2010) SM Short et al.   AQUATIC MICROBIAL ECOLOGY

Ribonucleotide reduction - horizontal transfer of a required function spans all three domains

(2010) Daniel Lundin et al.   BMC EVOLUTIONARY BIOLOGY

Tentative Characterization of New Environmental Giant Viruses by MALDI-TOF Mass Spectrometry

(2010) Bernard La Scola et al.   INTERVIROLOGY

Marine Prasinovirus Genomes Show Low Evolutionary Divergence and Acquisition of Protein Metabolism Genes by Horizontal Gene Transfer

(2010) H. Moreau et al.   JOURNAL OF VIROLOGY

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Giant virus with a remarkable complement of genes infects marine zooplankton

(2010) M. G. Fischer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0

(2010) Stéphane Guindon et al.   SYSTEMATIC BIOLOGY

Abundance, spatial distribution and genetic diversity ofOstreococcus tauriviruses in two different environments

(2010) Laure Bellec et al.   Environmental Microbiology Reports

Isolation of Prasinoviruses of the Green Unicellular Algae Ostreococcus spp. on a Worldwide Geographical Scale

(2009) L. Bellec et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Phylogenetic Analysis Indicates Evolutionary Diversity and Environmental Segregation of Marine Podovirus DNA Polymerase Gene Sequences

(2009) J. M. Labonte et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

DnaSP v5: a software for comprehensive analysis of DNA polymorphism data

(2009) P. Librado et al.   BIOINFORMATICS

From small hosts come big viruses: the complete genome of a secondOstreococcus taurivirus, OtV-1

(2009) Karen D. Weynberg et al.   ENVIRONMENTAL MICROBIOLOGY

SeaView Version 4: A Multiplatform Graphical User Interface for Sequence Alignment and Phylogenetic Tree Building

(2009) M. Gouy et al.   MOLECULAR BIOLOGY AND EVOLUTION

Molecular Phylogeny and Classification of the Mamiellophyceae class. nov. (Chlorophyta) based on Sequence Comparisons of the Nuclear- and Plastid-encoded rRNA Operons

(2009) Birger Marin et al.   PROTIST

Phylogenetic analysis of new Prasinoviruses (Phycodnaviridae) that infect the green unicellular algaeOstreococcus,BathycoccusandMicromonas

(2009) Laure Bellec et al.   Environmental Microbiology Reports

Phylogenetic Analysis of Members of the Phycodnaviridae Virus Family, Using Amplified Fragments of the Major Capsid Protein Gene

(2008) J. B. Larsen et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Wide genetic diversity of picoplanktonic green algae (Chloroplastida) in the Mediterranean Sea uncovered by a phylum-biased PCR approach

(2008) Manon Viprey et al.   ENVIRONMENTAL MICROBIOLOGY

Detection of inteins among diverse DNA polymerase genes of uncultivated members of the Phycodnaviridae

(2008) Alexander I Culley et al.   ISME Journal

Quantitative PCR measurements of the effects of introducing inosines into primers provides guidelines for improved degenerate primer design

(2008) Linda Zheng et al.   JOURNAL OF VIROLOGICAL METHODS

Life-Cycle and Genome of OtV5, a Large DNA Virus of the Pelagic Marine Unicellular Green Alga Ostreococcus tauri

(2008) Evelyne Derelle et al.   PLoS One

Taxonomic distribution of large DNA viruses in the sea

(2008) Adam Monier et al.   GENOME BIOLOGY