Comparative analysis of bacterial community-metagenomics in coastal Gulf of Mexico sediment microcosms following exposure to Macondo oil (MC252)

Identification of crude-oil components and microorganisms that cause souring under anaerobic conditions

(2013) R. Hasegawa et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Evaluating bacterial community structures in oil collected from the sea surface and sediment in the northern Gulf of Mexico after theDeepwater Horizonoil spill

(2013) Zhanfei Liu et al.   MicrobiologyOpen

Oil Impacts on Coastal Wetlands: Implications for the Mississippi River Delta Ecosystem after the Deepwater Horizon Oil Spill

(2012) Irving A. Mendelssohn et al.   BIOSCIENCE

Removal of Crude Oil by Microbial Consortium Isolated from Oil-Spilled Area in the Korean Western Coast

(2012) Su-Hee Cho et al.   BULLETIN OF ENVIRONMENTAL CONTAMINATION AND TOXICOLOGY

Deep-sea bacteria enriched by oil and dispersant from the Deepwater Horizon spill

(2012) Jacob Baelum et al.   ENVIRONMENTAL MICROBIOLOGY

Assessment of Microbial Richness in Pelagic Sediment of Andaman Sea by Bacterial Tag Encoded FLX Titanium Amplicon Pyrosequencing (bTEFAP)

(2012) Balakrishnan Sundarakrishnan et al.   INDIAN JOURNAL OF MICROBIOLOGY

Metagenome, metatranscriptome and single-cell sequencing reveal microbial response to Deepwater Horizon oil spill

(2012) Olivia U Mason et al.   ISME Journal

Metagenomics of the Svalbard Reindeer Rumen Microbiome Reveals Abundance of Polysaccharide Utilization Loci

(2012) Phillip B. Pope et al.   PLoS One

Microbial Community Analysis of a Coastal Salt Marsh Affected by the Deepwater Horizon Oil Spill

(2012) Melanie J. Beazley et al.   PLoS One

Chemical data quantify Deepwater Horizon hydrocarbon flow rate and environmental distribution

(2012) T. B. Ryerson et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Compositions of microbial communities associated with oil and water in a mesothermic oil field

(2011) Yuriy Kryachko et al.   ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY

Hydrocarbon-Degrading Bacteria and the Bacterial Community Response in Gulf of Mexico Beach Sands Impacted by the Deepwater Horizon Oil Spill

(2011) Joel E. Kostka et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Gulf of Mexico Oil Blowout Increases Risks to Globally Threatened Species

(2011) Claudio Campagna et al.   BIOSCIENCE

Oil Biodegradation and Bioremediation: A Tale of the Two Worst Spills in U.S. History

(2011) Ronald M. Atlas et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Atmospheric emissions from the Deepwater Horizon spill constrain air-water partitioning, hydrocarbon fate, and leak rate

(2011) T. B. Ryerson et al.   GEOPHYSICAL RESEARCH LETTERS

Characterization of an alkane-degrading methanogenic enrichment culture from production water of an oil reservoir after 274 days of incubation

(2011) Li-Ying Wang et al.   INTERNATIONAL BIODETERIORATION & BIODEGRADATION

Mangrove Bacterial Diversity and the Impact of Oil Contamination Revealed by Pyrosequencing: Bacterial Proxies for Oil Pollution

(2011) Henrique Fragoso dos Santos et al.   PLoS One

Genomic and physiological footprint of the Deepwater Horizon oil spill on resident marsh fishes

(2011) A. Whitehead et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Sublethal exposure to crude oil during embryonic development alters cardiac morphology and reduces aerobic capacity in adult fish

(2011) C. E. Hicken et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Evaluation of the bacterial diversity of Pressure ulcers using bTEFAP pyrosequencing

(2010) Drake M Smith et al.   BMC Medical Genomics

Oleibacter marinus gen. nov., sp. nov., a bacterium that degrades petroleum aliphatic hydrocarbons in a tropical marine environment

(2010) M. Teramoto et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Deep-Sea Oil Plume Enriches Indigenous Oil-Degrading Bacteria

(2010) Terry C. Hazen et al.   SCIENCE

Detection, expression and quantitation of the biodegradative genes in Antarctic microorganisms using PCR

(2009) Gitika Panicker et al.   ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY

PyNAST: a flexible tool for aligning sequences to a template alignment

(2009) J. G. Caporaso et al.   BIOINFORMATICS

Dyadobacter psychrophilus sp. nov., a psychrophilic bacterium isolated from soil

(2009) D.-C. Zhang et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Evaluation of the bacterial diversity in the feces of cattle using 16S rDNA bacterial tag-encoded FLX amplicon pyrosequencing (bTEFAP)

(2008) Scot E Dowd et al.   BMC MICROBIOLOGY

Use of bromodeoxyuridine immunocapture to identify psychrotolerant phenanthrene-degrading bacteria in phenanthrene-enriched polluted Baltic Sea sediments

(2008) Anna Edlund et al.   FEMS MICROBIOLOGY ECOLOGY

The microbial loop – 25 years later

(2008) Tom Fenchel   JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY

Accurate taxonomy assignments from 16S rRNA sequences produced by highly parallel pyrosequencers

(2008) Z. Liu et al.   NUCLEIC ACIDS RESEARCH

Tag-encoded pyrosequencing analysis of bacterial diversity in a single soil type as affected by management and land use

(2008) V. Acosta-Martínez et al.   SOIL BIOLOGY & BIOCHEMISTRY

Comparisons of different hypervariable regions of rrs genes for fingerprinting of microbial communities in paddy soils

(2008) Hui Li et al.   SOIL BIOLOGY & BIOCHEMISTRY