4.3 Review

Stable Lipid Bilayers Based on Micro- and Nano-Fabrication as a Platform for Recording Ion-Channel Activities

Journal

ANALYTICAL SCIENCES
Volume 28, Issue 11, Pages 1049-1057

Publisher

JAPAN SOC ANALYTICAL CHEMISTRY
DOI: 10.2116/analsci.28.1049

Keywords

-

Funding

  1. Japan Society for the Promotion of Science [24350032]
  2. JST (PRESTO)

Ask authors/readers for more resources

In this review, we will discuss our recent approaches for the formation of mechanically stable bilayer lipid membranes (BLMs) by combining with BLM formation and micro- and nano-fabrication techniques. BLMs were prepared across a microaperture fabricated in silicon (Si) chips or nanoporous alumina films using a minimized amount of organic solvent. Although BLMs spanned over the porous alumina film showed better electrical properties, such as background current noise and current transient, BLMs suspended in a thin Si3N4 septum showed a much superior BLM stability. The BLMs showed tolerance to a high voltage of +/- 1 V, a membrane lifetime of >40 h, and tolerance to repetitive solution exchanges. Application to a drug screening system has been examined by using the human ether-a-go-go-related gene (hERG) potassium channel as an illustrative example. The potentiality of the present system as a platform of the high-throughput analysis for ion-channel protein is also discussed.

Authors

I am an author on this paper
Click your name to claim this paper and add it to your profile.

Reviews

Primary Rating

4.3
Not enough ratings

Secondary Ratings

Novelty
-
Significance
-
Scientific rigor
-
Rate this paper

Recommended

Article Electrochemistry

Selective Stimulation of a Target Neuron in Micropatterned Neuronal Circuits Using a Pair of Needle Electrodes

Kouhei Hattori, Hekiru Kurakake, Junko Imai, Takuya Hashimoto, Mihoko Ishida, Koki Sato, Honoka Takahashi, Soichiro Oguma, Hideaki Yamamoto, Ayumi Hirano-Iwata, Takashi Tanii

Summary: Neurostimulation is a crucial technique for manipulating local neuronal circuits, but current methods have limitations in terms of precision and long-term monitoring. A new approach using two needle electrodes and micropatterning techniques shows promise for selectively targeting and stimulating single neurons. Results indicate that the method can stimulate a target neuron selectively by adjusting the position and voltage steepness of the two needle electrodes, making it suitable for long-term monitoring of neuronal circuit activity.

ELECTROCHEMISTRY (2021)

Article Chemistry, Multidisciplinary

Bactericidal Activity of Bulk Nanobubbles through Active Oxygen Species Generation

Masato Yamaguchi, Teng Ma, Daisuke Tadaki, Ayumi Hirano-Iwata, Yoshihiko Watanabe, Hiroyasu Kanetaka, Hiroshi Fujimori, Emiko Takemoto, Michio Niwano

Summary: The study found that the bactericidal effect was most significant in CO2-containing NB water, while N-2-NB water showed a slight bactericidal effect. Interestingly, the survival rate of E. coli was even higher in O-2-NB water than in pure water. The production of reactive oxygen species (ROS) was strongest in CO2-NB water, consistent with the bactericidal effect results.

LANGMUIR (2021)

Article Chemistry, Physical

Lateral voltage as a new input for artificial lipid bilayer systems

Teng Ma, Madoka Sato, Maki Komiya, Kensaku Kanomata, Takaya Watanabe, Xingyao Feng, Ryusuke Miyata, Daisuke Tadaki, Fumihiko Hirose, Yuzuru Tozawa, Ayumi Hirano-Iwata

Summary: The findings indicate that lateral voltage effectively regulates the transmembrane current in lipid bilayer systems, suitable for systems with ion channels or fullerenes.

FARADAY DISCUSSIONS (2022)

Article Physics, Applied

Selective arrangement of vesicles on artificial lipid membrane by biotin-avidin interaction

Kai Hashino, Daiya Mombayashi, Yuto Nakatani, Azusa Oshima, Masumi Yamaguchi, Akira Heya, Koji Sumitomo

Summary: Lipid bilayers suspended over microwells on Si substrates are promising platforms for nanobiodevices that mimic cell membranes. By using the biotin-avidin interaction, vesicles can be selectively arranged on the freestanding region of the lipid bilayer, facilitating the introduction of biomolecules into the nanobiodevices.

JAPANESE JOURNAL OF APPLIED PHYSICS (2022)

Article Chemistry, Multidisciplinary

Mechanism of Budded Virus Envelope Fusion into a Planar Bilayer Lipid Membrane on a SiO2 Substrate

Azusa Oshima, Kohei Nakanishi, Nahoko Kasai, Hiroshi Nakashima, Kanta Tsumoto, Koji Sumitomo

Summary: This study investigates membrane protein reconstitution and fusion dynamics using artificial planar bilayer lipid membranes (BLMs) and baculovirus-budded virus (BV) systems. The results demonstrate that BV fusion with BLMs is enhanced at lower pH and can effectively reconstitute membrane proteins. The study reveals the promising potential of BV fusion for the development of biodevices to examine membrane protein activity.

LANGMUIR (2022)

Article Chemistry, Analytical

Application of neural network based regression model to gas concentration analysis of TiO2 nanotube-type gas sensors

Kazuki Iwata, Hiroyuki Abe, Teng Ma, Daisuke Tadaki, Ayumi Hirano-Iwata, Yasuo Kimura, Shigeaki Suda, Michio Niwano

Summary: In this study, gas analysis of TiO2 nanotube (NT)-type integrated gas sensors was performed using a machine learning (ML) algorithm and neural network-based regression. It was found that increasing the number of sensor elements significantly improved the prediction accuracy of gas concentration.

SENSORS AND ACTUATORS B-CHEMICAL (2022)

Review Biochemistry & Molecular Biology

New Aspects of Bilayer Lipid Membranes for the Analysis of Ion Channel Functions

Hironori Kageyama, Teng Ma, Madoka Sato, Maki Komiya, Daisuke Tadaki, Ayumi Hirano-Iwata

Summary: This review discusses the applications of artificial bilayer lipid membrane (BLM) systems in the analysis of ion channel functions. It focuses on two BLM-based systems, cell-membrane mimicry and four-terminal BLM systems. The cell-membrane mimicry system can be used for evaluating drug side effects and has potential in personalized medicine. The four-terminal BLM system introduces lateral voltage as a novel input to regulate channel activities.

MEMBRANES (2022)

Article Biotechnology & Applied Microbiology

Filtration-processed biomass nanofiber electrodes for flexible bioelectronics

Daiki Ando, Tetsuhiko F. Teshima, Francisco Zurita, Hu Peng, Kota Ogura, Kenji Kondo, Lennart Weiss, Ayumi Hirano-Iwata, Markus Becherer, Joe Alexander, Bernhard Wolfrum

Summary: The increasing demand for bioelectronics has led to the development of materials that can bridge the gap between electronic devices and biological tissues. Biopolymers have gained attention as next-generation materials for bioelectronics due to their high biocompatibility, biodegradability, and sustainability. However, their use has been limited by the compatibility issues with traditional fabrication methods. This study presents a fabrication process for chitosan nanofiber films integrated with conductive materials, providing a potential solution for future bioelectronic devices based on biopolymer nanofibers.

JOURNAL OF NANOBIOTECHNOLOGY (2022)

Article Neurosciences

Microfluidic cell engineering on high-density microelectrode arrays for assessing structure-function relationships in living neuronal networks

Yuya Sato, Hideaki Yamamoto, Hideyuki Kato, Takashi Tanii, Shigeo Sato, Ayumi Hirano-Iwata

Summary: By utilizing cell engineering technology and neuronal networks in dissociated culture, we constructed modular neuronal networks to investigate the relationship between structure and function. Using high-density microelectrode arrays, we recorded the neural activity of the engineered neuronal networks and found that modular architecture enhances functional complexity by reducing excessive neural correlation between spatially segregated modules. This study highlights the importance of combining cell engineering technologies with high-density microelectrode array recordings in assessing the structure-function relationships in neuronal networks.

FRONTIERS IN NEUROSCIENCE (2023)

Article Multidisciplinary Sciences

Biological neurons act as generalization filters in reservoir computing

Takuma Sumi, Hideaki Yamamoto, Yuichi Katori, Koki Ito, Satoshi Moriya, Tomohiro Konno, Shigeo Sato, Ayumi Hirano-Iwata

Summary: Reservoir computing is a machine learning paradigm that utilizes the dynamics of high-dimensional nonlinear systems for processing time-series data. In this study, optogenetics and calcium imaging were used to investigate the computational capabilities of biological neuronal networks (BNNs) through a reservoir computing framework. The modular architecture of BNNs was found to positively correlate with classification accuracy, and BNNs exhibited short-term memory and categorical learning abilities. These findings contribute to our understanding of information representation in BNNs and have implications for the development of physical reservoir computing systems.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2023)

Article Biophysics

Model-free idealization: Adaptive integrated approach for idealization of ion-channel currents

Madoka Sato, Masanori Hariyama, Maki Komiya, Kae Suzuki, Yuzuru Tozawa, Hideaki Yamamoto, Ayumi Hirano-Iwata

Summary: This article introduces an idealization method for single-channel electrophysiological recordings that provides valuable information about the gating kinetics of ion channels. The method, called AI2, uses an adaptive integrated approach to process the noisy data and automatically determines the optimal noise reduction settings. The method has been validated and tested on both simulated and experimental data.

BIOPHYSICAL JOURNAL (2023)

Article Electrochemistry

Evaluation of respiratory and secretory activities of multicellular spheroids via electrochemiluminescence imaging

Kaoru Hiramoto, Keika Komatsu, Ryota Shikuwa, An Konno, Yusuke Sato, Ayumi Hirano-Iwata, Kosuke Ino, Hitoshi Shiku

Summary: Multicellular spheroids are important models in vitro for studying biological and pathological processes. Monitoring their cellular activities without labeling is challenging, but electrochemiluminescence (ECL) has the potential to track the activities of spheroids by displaying secreted molecules adhering to an electrode.

ELECTROCHIMICA ACTA (2023)

Article Multidisciplinary Sciences

Modular architecture facilitates noise-driven control of synchrony in neuronal networks

Hideaki Yamamoto, F. Paul Spitzner, Taiki Takemuro, Victor Buendia, Hakuba Murota, Carla Morante, Tomohiro Konno, Shigeo Sato, Ayumi Hirano-Iwata, Anna Levina, Viola Priesemann, Miguel A. Munoz, Johannes Zierenberg, Jordi Soriano

Summary: High-level information processing in the mammalian cortex requires both segregated processing in specialized circuits and integration across multiple circuits. One possible way to implement these demands is by flexibly switching between states with different levels of synchrony. The control of complex synchronization patterns in neuronal networks remains elusive, but this study provides insights by manipulating and stimulating networks of cortical neurons in vitro. Results show that a modular architecture enhances the network's sensitivity to external asynchronous stimulation and that the depletion of synaptic resources in stimulated neurons is the underlying mechanism for this effect.

SCIENCE ADVANCES (2023)

Article Chemistry, Physical

Two-dimensional water-molecule-cluster layers at nanobubble interfaces

Michio Niwano, Teng Ma, Kazuki Iwata, Daisuke Tadaki, Hideaki Yamamoto, Yasuo Kimura, Ayumi Hirano-Iwata

Summary: The interfacial layer structure of bulk nanobubbles was determined, revealing the presence of three-, four-, and five-membered ring clusters of water molecules. It was hypothesized that a specific interfacial layer with a hydrogen bond network stabilizes the nanobubbles. The hardness of the interfacial layer was found to be dependent on the encapsulated gas species.

JOURNAL OF COLLOID AND INTERFACE SCIENCE (2023)

Article Mathematics, Interdisciplinary Applications

Designing the human-centric IoT society: Cooperative industry-academic strategies for creative future connection

Yoshihiko Horio, Kiyotaka Naoe, Shigeo Sato, Yasunori Yamanouchi, Yasunari Takaura, Mitsuyuki Yamaguchi, Masato Morishima, Ayumi Hirano-Iwata

Summary: This paper summarizes the open panel discussions on designing a human-centric IoT society held at the 2021 Nonlinear Science Workshop. Participants from academia and industry shared their strategies and ideas for enhancing human well-being in the future IoT society.

IEICE NONLINEAR THEORY AND ITS APPLICATIONS (2022)

No Data Available