De Novo Assembly and Characterization of the Transcriptome of the Chinese Medicinal Herb, Gentiana rigescens

Molecular cloning and expression analysis of WRKY transcription factor genes in Salvia miltiorrhiza

(2015) Caili Li et al.   BMC GENOMICS

A 150 kDa plasma membrane complex of AtNRT2.5 and AtNAR2.1 is the major contributor to constitutive high-affinity nitrate influx inArabidopsis thaliana

(2015) ZORICA KOTUR et al.   PLANT CELL AND ENVIRONMENT

Overexpression of Late Embryogenesis Abundant 14 enhances Arabidopsis salt stress tolerance

(2014) Fengjuan Jia et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

RNA sequencing on Solanum lycopersicum trichomes identifies transcription factors that activate terpene synthase promoters

(2014) Eleni A Spyropoulou et al.   BMC GENOMICS

Triterpenoid Saponin Biosynthetic Pathway Profiling and Candidate Gene Mining of the Ilex asprella Root Using RNA-Seq

(2014) Xiasheng Zheng et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

7-Deoxyloganetic acid synthase catalyzes a key 3 step oxidation to form 7-deoxyloganetic acid in Catharanthus roseus iridoid biosynthesis

(2014) Vonny Salim et al.   PHYTOCHEMISTRY

Group 5 LEA protein, ZmLEA5C , enhance tolerance to osmotic and low temperature stresses in transgenic tobacco and yeast

(2014) Yang Liu et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Use of gibberellic acid to overcome the allelopathic effect of a range of species on the germination of seeds of Gentiana rigescens, a medicinal herb

(2014) J. Zhang et al.   SEED SCIENCE AND TECHNOLOGY

TTG2-regulated development is related to expression of putative AUXIN RESPONSE FACTOR genes in tobacco

(2013) Qian Zhu et al.   BMC GENOMICS

Transcriptomics in the RNA-seq era

(2013) Paul A McGettigan   CURRENT OPINION IN CHEMICAL BIOLOGY

A reference transcriptome and inferred proteome for the salamander Notophthalmus viridescens

(2013) Ilgar Abdullayev et al.   EXPERIMENTAL CELL RESEARCH

Rigenolide A, a new secoiridoid glucoside with a cyclobutane skeleton, and three new acylated secoiridoid glucosides from Gentiana rigescens Franch

(2013) Yoshihiro Suyama et al.   FITOTERAPIA

Analysis of the Dendrobium officinale transcriptome reveals putative alkaloid biosynthetic genes and genetic markers

(2013) Xu Guo et al.   GENE

De novo transcriptome analysis of Liriodendron chinense petals and leaves by Illumina sequencing

(2013) Ying Yang et al.   GENE

Plant P450s as versatile drivers for evolution of species-specific chemical diversity

(2013) B. Hamberger et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Cytochrome P450-enzymes involved in the biosynthesis of mono- and sesquiterpenes

(2013) Corinna Weitzel et al.   PHYTOCHEMISTRY REVIEWS

Calcium/Calmodulin-Dependent Protein Kinase Is Negatively and Positively Regulated by Calcium, Providing a Mechanism for Decoding Calcium Responses during Symbiosis Signaling

(2013) J. B. Miller et al.   PLANT CELL

A 7-Deoxyloganetic Acid Glucosyltransferase Contributes a Key Step in Secologanin Biosynthesis in Madagascar Periwinkle

(2013) K. Asada et al.   PLANT CELL

Virus-induced gene silencing identifiesCatharanthus roseus7-deoxyloganic acid-7-hydroxylase, a step in iridoid and monoterpene indole alkaloid biosynthesis

(2013) Vonny Salim et al.   PLANT JOURNAL

Promoter analysis reveals cis-regulatory motifs associated with the expression of the WRKY transcription factor CrWRKY1 in Catharanthus roseus

(2013) Zhirong Yang et al.   PLANTA

De Novo Sequencing and Transcriptome Analysis of Wolfiporia cocos to Reveal Genes Related to Biosynthesis of Triterpenoids

(2013) Shaohua Shu et al.   PLoS One

Transcriptome Analysis of Medicinal Plant Salvia miltiorrhiza and Identification of Genes Related to Tanshinone Biosynthesis

(2013) Lei Yang et al.   PLoS One

Transcriptome Analysis of Portunus trituberculatus in Response to Salinity Stress Provides Insights into the Molecular Basis of Osmoregulation

(2013) Jianjian Lv et al.   PLoS One

Construction of the first genetic linkage map of Japanese gentian (Gentianaceae)

(2012) Takashi Nakatsuka et al.   BMC GENOMICS

Activation of calcium- and calmodulin-dependent protein kinase (CCaMK), the central regulator of plant root endosymbiosis

(2012) Sylvia Singh et al.   CURRENT OPINION IN PLANT BIOLOGY

Transcriptome Analysis Reveals Putative Genes Involved in Iridoid Biosynthesis in Rehmannia glutinosa

(2012) Peng Sun et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Nitric oxide-activated calcium/calmodulin-dependent protein kinase regulates the abscisic acid-induced antioxidant defence in maize

(2012) F. Ma et al.   JOURNAL OF EXPERIMENTAL BOTANY

Transcriptional Regulation of Plant Secondary MetabolismF

(2012) Chang-Qing Yang et al.   Journal of Integrative Plant Biology

Rhizobial and Fungal Symbioses Show Different Requirements for Calmodulin Binding to Calcium Calmodulin-Dependent Protein Kinase in Lotus japonicus

(2012) Y. Shimoda et al.   PLANT CELL

Nuclear-Localized and Deregulated Calcium- and Calmodulin-Dependent Protein Kinase Activates Rhizobial and Mycorrhizal Responses in Lotus japonicus

(2012) N. Takeda et al.   PLANT CELL

The Arabidopsis Nitrate Transporter NRT2.4 Plays a Double Role in Roots and Shoots of Nitrogen-Starved Plants

(2012) T. Kiba et al.   PLANT CELL

Functional Assessment of the Medicago truncatula NIP/LATD Protein Demonstrates That It Is a High-Affinity Nitrate Transporter

(2012) R. Bagchi et al.   PLANT PHYSIOLOGY

De Novo Sequencing and Characterization of the Floral Transcriptome of Dendrocalamus latiflorus (Poaceae: Bambusoideae)

(2012) Xue-Mei Zhang et al.   PLoS One

Genetic diversity and gentiopicroside content of four Gentiana species in China revealed by ISSR and HPLC methods

(2011) Peng Zheng et al.   BIOCHEMICAL SYSTEMATICS AND ECOLOGY

Determination of Mineral Elements in Gentiana rigescens from Different Zones of Yunnan, China

(2011) Jinyu Zhang et al.   BIOLOGICAL TRACE ELEMENT RESEARCH

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

(2011) Bo Li et al.   BMC BIOINFORMATICS

A single-base substitution suppresses flower color mutation caused by a novel miniature inverted-repeat transposable element in gentian

(2011) Masahiro Nishihara et al.   MOLECULAR GENETICS AND GENOMICS

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

Production of picotee-type flowers in Japanese gentian by CRES-T

(2011) Takashi Nakatsuka et al.   Plant Biotechnology

The Transcription Factor CrWRKY1 Positively Regulates the Terpenoid Indole Alkaloid Biosynthesis in Catharanthus roseus

(2011) N. Suttipanta et al.   PLANT PHYSIOLOGY

A Novel Interaction between CCaMK and a Protein Containing the Scythe_N Ubiquitin-Like Domain in Lotus japonicus

(2011) H. Kang et al.   PLANT PHYSIOLOGY

Fast Identification and Removal of Sequence Contamination from Genomic and Metagenomic Datasets

(2011) Robert Schmieder et al.   PLoS One

Group 3 late embryogenesis abundant protein in Arabidopsis: structure, regulation, and function

(2010) PengShan Zhao et al.   ACTA PHYSIOLOGIAE PLANTARUM

Ribulose-1,5-bisphosphate carboxylase/oxygenase genes as a functional marker for chemolithoautotrophic halophilic sulfur-oxidizing bacteria in hypersaline habitats

(2010) T. P. Tourova et al.   MICROBIOLOGY-SGM

Overexpression of G10H and ORCA3 in the hairy roots of Catharanthus roseus improves catharanthine production

(2010) Cui-Ting Wang et al.   PLANT CELL REPORTS

Structure and expression profiling of a novel calcium-dependent protein kinase gene PgCDPK1a in roots, leaves, and cell cultures of Panax ginseng

(2010) Konstantin V. Kiselev et al.   PLANT CELL TISSUE AND ORGAN CULTURE

Genetic engineering of novel flower colour by suppression of anthocyanin modification genes in gentian

(2009) Takashi Nakatsuka et al.   JOURNAL OF PLANT PHYSIOLOGY

Isolation and Characterization of AaWRKY1, an Artemisia annua Transcription Factor that Regulates the Amorpha-4,11-diene Synthase Gene, a Key Gene of Artemisinin Biosynthesis

(2009) Dongming Ma et al.   PLANT AND CELL PHYSIOLOGY

Mapping and quantifying mammalian transcriptomes by RNA-Seq

(2008) Ali Mortazavi et al.   NATURE METHODS

High-throughput functional annotation and data mining with the Blast2GO suite

(2008) S. Gotz et al.   NUCLEIC ACIDS RESEARCH

Induced Plant Defenses in the Natural Environment: Nicotiana attenuata WRKY3 and WRKY6 Coordinate Responses to Herbivory

(2008) M. Skibbe et al.   PLANT CELL