Article
Environmental Sciences
Xiang Xiao, En-Jing He, Xue-Rong Lu, Li-Jun Wu, Yang-Yang Fan, Han-Qing Yu
Summary: The study shows that silver nanoparticles possess strong antibacterial ability, leading to the majority of bacteria entering a viable but non-culturable state. Environmental factors such as Cl- and illumination can affect the solubility of nanoparticles and thereby impact the survival state of bacteria.
SCIENCE OF THE TOTAL ENVIRONMENT
(2021)
Article
Biochemistry & Molecular Biology
Chaofan Hou, Lin Liu, Xian Ju, Yunzhu Xiao, Bingyu Li, Conghui You
Summary: Iron serves as a cofactor of many enzymes, but excess iron can be detrimental to cells. The regulatory role of the ferric uptake regulator (Fur) in iron metabolism and its comprehensive physiological effects have not been fully understood. Through a combination of transcriptomic, ChIP-seq, and physiological studies, our research revealed expanded regulation by Fur and intriguing differences between its repression and activation of target genes. Furthermore, we discovered that Fur links iron metabolism to essential cellular processes, including carbon metabolism, respiration, and motility.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2023)
Article
Cell Biology
Justin J. Zik, Sung Hwan Yoon, Ziqiang Guan, Gabriele Stankeviciute Skidmore, Ridhi R. Gudoor, Karen M. Davies, Adam M. Deutschbauer, David R. Goodlett, Eric A. Klein, Kathleen R. Ryan
Summary: Lipid A is not essential in Caulobacter crescentus due to mutations in the ferric uptake regulator fur, which allows the bacteria to survive when lipid A synthesis is blocked. In an altered regulatory landscape, anionic sphingolipids can support the integrity of a lipid A-deficient outer membrane.
Article
Environmental Sciences
Davide Vettori, Costantino Manes, Davide Dalmazzo, Luca Ridolfi
Summary: Contrary to previous studies, high shear stresses do not affect the viability of Escherichia coli, and it can resist high shear forces under certain hydrodynamic conditions.
Article
Multidisciplinary Sciences
Wen Sun, Ke Yang, Risheng Li, Tianqing Chen, Longfei Xia, Zhao Wang, Xubo Sun
Summary: This research analyzed the structure of a microorganism group in sediment and the absolute abundance of two typical pathogenic bacteria in Shahe Reservoir, China. The results show a positive correlation between the abundance of pathogenic bacteria and water eutrophication in the reservoir sediment. Additionally, the distribution of the pathogenic bacteria varies with depth and location in the sediment.
SCIENTIFIC REPORTS
(2021)
Article
Food Science & Technology
Junyan Liu, Tengyi Huang, Riyi Xu, Zhufang Xiang, Thanapop Soteyome, Xiangyi Chen, Qianfei Zhang, Qiurong Huang, Zixu Wu, Yunyi Huang, Gongliang Liu, Chunyun Qu, Gamini Seneviratne, Birthe Kjellerup, Zhenbo Xu
Summary: In this study, a PMA-PSR system was designed for accurate determination of viable cells of Escherichia coli O157:H7. The PSR technique was optimized and tested for sensitivity and specificity in pure culture and different food samples. By treating cells with PMA, residual DNA from dead cells was removed, enabling specific detection of viable cells. The system was successfully applied in food samples containing VBNC cells, providing accurate results.
LWT-FOOD SCIENCE AND TECHNOLOGY
(2023)
Article
Biology
Anamaria Babosan, David Skurnik, Anaelle Muggeo, Gerald B. Pier, Zeynep Baharoglu, Thomas Jove, Marie-Cecile Ploy, Sophie Griveau, Fethi Bedioui, Sebastien Vergnolle, Sophie Moussalih, Christophe de Champs, Didier Mazel, Thomas Guillard
Summary: PMQR genes promote high-level bacterial resistance to fluoroquinolone antibiotics, and we found that aminoglycosides can induce the SOS response, leading to elevated transcription of qnrD. The induction of SOS response is due to nitric oxide accumulation caused by sub-MIC of aminoglycosides.
Article
Veterinary Sciences
Lulu Niu, Weizhen Cai, Xi Cheng, Zhe Li, Jianming Ruan, Fangguo Li, Kezong Qi, Jian Tu
Summary: This study reveals the significance of Fur in the mobility of Avian pathogenic Escherichia coli (APEC). Fur and RyhB are extensively regulated in APEC, and RyhB is negatively regulated by Fur. The results show that Fur plays an important role in the bacterial movement, and this finding is further supported by experimental evidence.
FRONTIERS IN VETERINARY SCIENCE
(2022)
Article
Microbiology
Sariqa Wagley, Helen Morcrette, Andrea Kovacs-Simon, Zheng R. Yang, Ann Power, Richard K. Tennant, John Love, Neil Murray, Richard W. Titball, Clive S. Butler
Summary: Members of the Proteobacteria can enter a viable but non culturable (VBNC) state as a survival strategy under stressful conditions. Using Vibrio parahaemolyticus as a model organism, distinct subpopulations in the VBNC state with different resuscitation potentials and proteomic profiles were identified. Deletion of the lactate dehydrogenase gene triggered cells to enter VBNC state, while lactate addition extended resuscitation potential. The ability to survive in VBNC state may be linked to overcoming oxidative stress.
Article
Chemistry, Physical
Dan Wu, Wenming Zhang, Baihe Fu, Zhonghai Zhang
Summary: Biological hydrogen production has great potential in the field of renewable energy, and this research demonstrates the significant enhancement of biological hydrogen production through solar-light induction and intra-cellular inorganic-biological hybrid system optimization.
Article
Food Science & Technology
Erton Gomes da Silva, Leonardo Ereno Tadielo, Thiago Henrique Belle, Emanoelli Aparecida Rodrigues dos Santos, Jhennifer Arruda Schmiedt, Fabio Sossai Possebon, Juliano Goncalves Pereira, Luciano dos Santos Bersot
Summary: This study found that reducing the water flow in the final wash of chicken slaughter process does not affect the microbiological quality of the chicken carcasses.
LWT-FOOD SCIENCE AND TECHNOLOGY
(2021)
Article
Environmental Sciences
Laurice Beatrice Raphaelle O. dela Pena, Mae Ashley G. Nacario, Nicole R. Bolo, Windell L. Rivera
Summary: This study detected multidrug-resistant Escherichia coli in samples collected around Laguna Lake in the Philippines and identified fecal and sewage sources as potential reservoirs of antibiotic-resistant bacteria. The results emphasize the importance of responsible antibiotic usage to mitigate the spread of antibiotic resistance.
Article
Agronomy
Ana Sofia Soares, Carla Miranda, Ana Claudia Coelho, Henrique Trindade
Summary: Microbial water quality is a major concern worldwide, and this study aimed to evaluate the microbiological quality of drinking water on dairy cattle farms in Portugal. The study found that 59.4% of the cattle farms had poor water quality, and identified bacterial species such as Escherichia coli and Enterococcus faecalis. It was also found that farms that did not routinely perform disinfection had the worst water quality. This research highlights the importance of screening drinking water quality on cattle farms for improved health outcomes in both animals and humans.
Article
Microbiology
Matthew McIntosh, Thorsten Koechling, Anna Latz, Jonas Kretz, Sandra Heinen, Anne Konzer, Gabriele Klug
Summary: Under heat stress, Rhodobacter sphaeroides responds by producing a broad range of transcripts while simultaneously preventing translation from nearly all of them, indicating that selective protein production depends on the untranslated region of the transcript.
ENVIRONMENTAL MICROBIOLOGY
(2021)
Article
Fisheries
Likentso Sylvia Shuping, Izanne Susan Human, Ryk Lues, Arnelia Natalie Paulse
Summary: Bivalve molluscs are good protein sources and play important ecological roles. They can accumulate materials in their tissues, making them suitable for biomonitoring of environmental conditions. This study investigated bacterial microbiota in shellfish farms using pathogens associated with foodborne disease outbreaks. E. coli concentrations were low and Salmonella and Vibrio were not detected, indicating the safety of the molluscs for human consumption. More studies are needed on the identified bacterial species.
AQUACULTURE RESEARCH
(2023)
Article
Chemistry, Physical
Nurgun Buyukkidan, Cengiz Yenikaya, Haulil Ilkimen, Ceyda Karahan, Cihan Darcan, Tulin Korkmaz, Yasemin Suzen
JOURNAL OF MOLECULAR STRUCTURE
(2015)
Article
Biology
Onder Idil, Ikbal Macit, Ozge Kaygusuz, Cihan Darcan
ACTA BIOLOGICA HUNGARICA
(2016)
Article
Chemistry, Inorganic & Nuclear
Okan Zafer Yesilel, Bingul Karamahmut, Fatih Semerci, Cihan Darcan, Filiz Yilmaz
JOURNAL OF SOLID STATE CHEMISTRY
(2017)
Article
Marine & Freshwater Biology
Cihan Darcan
Article
Chemistry, Multidisciplinary
Fatih Semerci, Okan Zafer Yesilel, Seda Keskin, Cihan Darcan, Murat Tas, Hakan Dal
Article
Chemistry, Inorganic & Nuclear
Gunes Gunay, Okan Zafer Yesilel, Cihan Darcan, Seda Keskin, Orhan Buyukgungor
INORGANICA CHIMICA ACTA
(2013)
Article
Chemistry, Physical
Vinod Kumar Gupta, Necip Atar, Mehmet Lutfi Yola, Cihan Darcan, Onder Idil, Zafer Ustundag, Suhas
JOURNAL OF MOLECULAR LIQUIDS
(2013)
Article
Chemistry, Inorganic & Nuclear
Hakan Erer, Okan Zafer Yesilel, Cihan Darcan, Orhan Buyukgungor
Article
Chemistry, Inorganic & Nuclear
Okan Zafer Yesilel, Inci Ilker, Mustafa Serkan Soylu, Cihan Darcan, Yasemin Suzen
Article
Chemistry, Inorganic & Nuclear
N. Buyukkidan, C. Yenikaya, H. Ilkimen, C. Karahan, C. Darcan, E. Sahin
RUSSIAN JOURNAL OF COORDINATION CHEMISTRY
(2013)
Article
Microbiology
Onder Idil, Cihan Darcan, Tevfik Ozen, Resit Ozkanca
JUNDISHAPUR JOURNAL OF MICROBIOLOGY
(2013)
Article
Biotechnology & Applied Microbiology
Cihan Darcan, Ozge Kaygusuz, Tulin Korkmaz
JOURNAL OF PURE AND APPLIED MICROBIOLOGY
(2013)
Article
Environmental Sciences
Cihan Darcan, Mustafa Kahyaoglu
BIOMEDICAL AND ENVIRONMENTAL SCIENCES
(2012)
Article
Biotechnology & Applied Microbiology
Onder Idil, Cihan Darcan, Resit Ozkanca
JOURNAL OF PURE AND APPLIED MICROBIOLOGY
(2011)