Application of metagenome analysis to characterize the molecular diversity and saxitoxin-producing potentials of a cyanobacterial community: a case study in the North Han River, Korea

Proteogenomics of a saxitoxin-producing and non-toxic strain of A nabaena circinalis (cyanobacteria) in response to extracellular NaCl and phosphate depletion

(2016) Paul M. D'Agostino et al.   ENVIRONMENTAL MICROBIOLOGY

Physiological and transcriptional responses to inorganic nutrition in a tropical Pacific strain of Alexandrium minutum: Implications for the saxitoxin genes and toxin production

(2016) Kieng Soon Hii et al.   HARMFUL ALGAE

Paralytic shellfish toxin biosynthesis in cyanobacteria and dinoflagellates: A molecular overview

(2016) Da-Zhi Wang et al.   Journal of Proteomics

Advances in genomics, transcriptomics and proteomics of toxin-producing cyanobacteria

(2016) Paul M. D'Agostino et al.   Environmental Microbiology Reports

Microcystin Biosynthesis andmcyAExpression in Geographically DistinctMicrocystisStrains under Different Nitrogen, Phosphorus, and Boron Regimes

(2016) Ankita Srivastava et al.   Biomed Research International

Elevated Na+ and pH influence the production and transport of saxitoxin in the cyanobacteria A nabaena circinalis  AWQC131C and C ylindrospermopsis raciborskii  T3

(2015) Sarah E. Ongley et al.   ENVIRONMENTAL MICROBIOLOGY

Transcriptomic response during phage infection of a marine cyanobacterium under phosphorus-limited conditions

(2015) Xingqin Lin et al.   ENVIRONMENTAL MICROBIOLOGY

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Characterization of saxitoxin production and release and phylogeny of sxt genes in paralytic shellfish poisoning toxin-producing Aphanizomenon gracile

(2014) María Cristina Casero et al.   HARMFUL ALGAE

Fast and sensitive protein alignment using DIAMOND

(2014) Benjamin Buchfink et al.   NATURE METHODS

Impact of Environmental Factors on the Regulation of Cyanotoxin Production

(2014) Thangavelu Boopathi et al.   Toxins

Phylogeography of Cylindrospermopsin and Paralytic Shellfish Toxin-Producing Nostocales Cyanobacteria from Mediterranean Europe (Spain)

(2013) Samuel Cirés et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

(2013) Koichiro Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Cylindrospermopsin and Saxitoxin Synthetase Genes in Cylindrospermopsis raciborskii Strains from Brazilian Freshwater

(2013) Caroline Hoff-Risseti et al.   PLoS One

Comparison of DNA Extraction Methods in Analysis of Salivary Bacterial Communities

(2013) Vladimir Lazarevic et al.   PLoS One

Characterization of paralytic shellfish toxins from Lyngbya wollei dominated mats collected from two Florida springs

(2012) Amanda J. Foss et al.   HARMFUL ALGAE

MetaVelvet: an extension of Velvet assembler to de novo metagenome assembly from short sequence reads

(2012) Toshiaki Namiki et al.   NUCLEIC ACIDS RESEARCH

Assessment of Metagenomic Assembly Using Simulated Next Generation Sequencing Data

(2012) Daniel R. Mende et al.   PLoS One

Integrative analysis of environmental sequences using MEGAN4

(2011) D. H. Huson et al.   GENOME RESEARCH

Controlling harmful cyanobacterial blooms in a world experiencing anthropogenic and climatic-induced change

(2011) Hans W. Paerl et al.   SCIENCE OF THE TOTAL ENVIRONMENT

First report of saxitoxin production by a species of the freshwater benthic cyanobacterium, Scytonema Agardh

(2011) Francine M.J. Smith et al.   TOXICON

Detection of Saxitoxin-Producing Cyanobacteria and Anabaena circinalis in Environmental Water Blooms by Quantitative PCR

(2010) J. Al-Tebrineh et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Paralytic Shellfish Poisoning Toxin-Producing Cyanobacterium Aphanizomenon gracile in Northeast Germany

(2010) A. Ballot et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

On the Chemistry, Toxicology and Genetics of the Cyanobacterial Toxins, Microcystin, Nodularin, Saxitoxin and Cylindrospermopsin

(2010) Leanne Pearson et al.   Marine Drugs

FragGeneScan: predicting genes in short and error-prone reads

(2010) Mina Rho et al.   NUCLEIC ACIDS RESEARCH

Origin of Saxitoxin Biosynthetic Genes in Cyanobacteria

(2009) Ahmed Moustafa et al.   PLoS One

Biosynthetic Intermediate Analysis and Functional Homology Reveal a Saxitoxin Gene Cluster in Cyanobacteria

(2008) R. Kellmann et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Velvet: Algorithms for de novo short read assembly using de Bruijn graphs

(2008) D. R. Zerbino et al.   GENOME RESEARCH