QTL Mapping Combined With Comparative Analyses Identified Candidate Genes for Reduced Shattering in Setaria italica

A high-density genetic map and QTL analysis of agronomic traits in foxtail millet [Setaria italica (L.) P. Beauv.] using RAD-seq

(2017) Jun Wang et al.   PLoS One

Abscission zone development in Setaria viridis and its domesticated relative, Setaria italica

(2016) John G. Hodge et al.   AMERICAN JOURNAL OF BOTANY

A high density genetic map and QTL for agronomic and yield traits in Foxtail millet [Setaria italica (L.) P. Beauv.]

(2016) Xiaomei Fang et al.   BMC GENOMICS

Genetic diversity and origin of North American green foxtail [Setaria viridis (L.) Beauv.] accessions

(2016) Stephan Schröder et al.   GENETIC RESOURCES AND CROP EVOLUTION

Sequence-tagged high-density genetic maps ofZoysia japonicaprovide insights into genome evolution in Chloridoideae

(2015) Fangfang Wang et al.   PLANT JOURNAL

A transposable element in a NAC gene is associated with drought tolerance in maize seedlings

(2015) Hude Mao et al.   Nature Communications

Morphological diversity and genetic regulation of inflorescence abscission zones in grasses

(2014) Andrew N. Doust et al.   AMERICAN JOURNAL OF BOTANY

Population genetics ofSetaria viridis, a new model system

(2014) Pu Huang et al.   MOLECULAR ECOLOGY

Beyond the single gene: How epistasis and gene-by-environment effects influence crop domestication

(2014) A. N. Doust et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Comparison of class 2 transposable elements at superfamily resolution reveals conserved and distinct features in cereal grass genomes

(2013) Yujun Han et al.   BMC GENOMICS

A haplotype map of genomic variations and genome-wide association studies of agronomic traits in foxtail millet (Setaria italica)

(2013) Guanqing Jia et al.   NATURE GENETICS

Reference genome sequence of the model plant Setaria

(2012) Jeffrey L Bennetzen et al.   NATURE BIOTECHNOLOGY

Genome sequence of foxtail millet (Setaria italica) provides insights into grass evolution and biofuel potential

(2012) Gengyun Zhang et al.   NATURE BIOTECHNOLOGY

Parallel domestication of the Shattering1 genes in cereals

(2012) Zhongwei Lin et al.   NATURE GENETICS

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Genetic Control of Seed Shattering in Rice by the APETALA2 Transcription Factor SHATTERING ABORTION1

(2012) Y. Zhou et al.   PLANT CELL

Setaria viridis and Setaria italica, model genetic systems for the Panicoid grasses

(2011) P. Li et al.   JOURNAL OF EXPERIMENTAL BOTANY

Miniature Inverted-Repeat Transposable Elements (MITEs) Have Been Accumulated through Amplification Bursts and Play Important Roles in Gene Expression and Species Diversity in Oryza sativa

(2011) C. Lu et al.   MOLECULAR BIOLOGY AND EVOLUTION

Integrative genomics viewer

(2011) James T Robinson et al.   NATURE BIOTECHNOLOGY

Unexpected consequences of a sudden and massive transposon amplification on rice gene expression

(2009) Ken Naito et al.   NATURE

Foxtail Millet: A Sequence-Driven Grass Model System

(2009) A. N. Doust et al.   PLANT PHYSIOLOGY

Agricultural origins and the isotopic identity of domestication in northern China

(2009) L. Barton et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA