Pig Farmers’ Homes Harbor More Diverse Airborne Bacterial Communities Than Pig Stables or Suburban Homes

Indoor bacteria and asthma in adults: a multicentre case–control study within ECRHS II

(2018) Juha Pekkanen et al.   EUROPEAN RESPIRATORY JOURNAL

Contribution of Vegetation to the Microbial Composition of Nearby Outdoor Air

(2016) Despoina S. Lymperopoulou et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Quality filtering of Illumina index reads mitigates sample cross-talk

(2016) Erik Scott Wright et al.   BMC GENOMICS

Phylogenomic analysis of the family Peptostreptococcaceae (Clostridium cluster XI) and proposal for reclassification of Clostridium litorale (Fendrich et al. 1991) and Eubacterium acidaminophilum (Zindel et al. 1989) as Peptoclostridium litorale gen. nov. comb. nov. and Peptoclostridium acidaminophilum comb. nov.

(2016)   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

VSEARCH: a versatile open source tool for metagenomics

(2016) Torbjørn Rognes et al.   PeerJ

Allergy associations with the adult fecal microbiota: Analysis of the American Gut Project

(2016) Xing Hua et al.   EBioMedicine

Appearance of β-lactam Resistance Genes in Agricultural Soils and Clinical Isolates over the 20th Century

(2016) David W. Graham et al.   Scientific Reports

The Danish urban-rural gradient of allergic sensitization and disease in adults

(2015) G. Elholm et al.   CLINICAL AND EXPERIMENTAL ALLERGY

Hunt for the origin of allergy - comparing the Finnish and Russian Karelia

(2015) T. Haahtela et al.   CLINICAL AND EXPERIMENTAL ALLERGY

Manure removal system influences the abundance and composition of airborne biotic contaminants in swine confinement buildings

(2015) Priyanka Kumari et al.   ENVIRONMENTAL MONITORING AND ASSESSMENT

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(2015) Eric M. Kettleson et al.   ENVIRONMENTAL RESEARCH

Electrostatic dust collectors compared to inhalable samplers for measuring endotoxin concentrations in farm homes

(2015) B. Kilburg-Basnyat et al.   INDOOR AIR

Exposure levels, determinants and IgE mediated sensitization to bovine allergens among Danish farmers and non-farmers

(2015) V. Schlünssen et al.   INTERNATIONAL JOURNAL OF HYGIENE AND ENVIRONMENTAL HEALTH

Performance of electrostatic dust collectors (EDCs) for endotoxin assessment in homes: Effect of mailing, placement, heating, and electrostatic charge

(2015) Brita Kilburg-Basnyat et al.   JOURNAL OF OCCUPATIONAL AND ENVIRONMENTAL HYGIENE

Early-Life Exposure to Clostridium leptum Causes Pulmonary Immunosuppression

(2015) Fei Huang et al.   PLoS One

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(2015) Rachel I. Adams et al.   Microbiome

Microbiota of the indoor environment: a meta-analysis

(2015) Rachel I. Adams et al.   Microbiome

Intestine-derived Clostridium leptum induces murine tolerogenic dendritic cells and regulatory T cells in vitro

(2014) Ya-Nan Li et al.   HUMAN IMMUNOLOGY

Effects of early-life exposure to allergens and bacteria on recurrent wheeze and atopy in urban children

(2014) Susan V. Lynch et al.   JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY

Transmission through air as a possible route of exposure for MRSA

(2014) Marian E H Bos et al.   Journal of Exposure Science and Environmental Epidemiology

Shotgun Pyrosequencing Metagenomic Analyses of Dusts from Swine Confinement and Grain Facilities

(2014) Robert J. Boissy et al.   PLoS One

Seasonal Variability in Airborne Biotic Contaminants in Swine Confinement Buildings

(2014) Priyanka Kumari et al.   PLoS One

Longitudinal analysis of microbial interaction between humans and the indoor environment

(2014) S. Lax et al.   SCIENCE

Unifying the analysis of high-throughput sequencing datasets: characterizing RNA-seq, 16S rRNA gene sequencing and selective growth experiments by compositional data analysis

(2014) Andrew D Fernandes et al.   Microbiome

A genomic update on clostridial phylogeny: Gram-negative spore formers and other misplaced clostridia

(2013) Natalya Yutin et al.   ENVIRONMENTAL MICROBIOLOGY

Indoor airborne bacterial communities are influenced by ventilation, occupancy, and outdoor air source

(2013) J. F. Meadow et al.   INDOOR AIR

Become a farmer and avoid new allergic sensitization: Adult farming exposures protect against new-onset atopic sensitization

(2013) Grethe Elholm et al.   JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY

The Variability of the 16S rRNA Gene in Bacterial Genomes and Its Consequences for Bacterial Community Analyses

(2013) Tomáš Větrovský et al.   PLoS One

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

(2013) Paul J. McMurdie et al.   PLoS One

ANOVA-Like Differential Expression (ALDEx) Analysis for Mixed Population RNA-Seq

(2013) Andrew D. Fernandes et al.   PLoS One

Effect of oral feeding with Clostridium leptum on regulatory T-cell responses and allergic airway inflammation in mice

(2012) Ya-nan Li et al.   ANNALS OF ALLERGY ASTHMA & IMMUNOLOGY

Monitoring airborne biotic contaminants in the indoor environment of pig and poultry confinement buildings

(2012) Pei-Ying Hong et al.   ENVIRONMENTAL MICROBIOLOGY

Community structure of bacteria and fungi in aerosols of a pig confinement building

(2012) Anja Kristiansen et al.   FEMS MICROBIOLOGY ECOLOGY

Protection from childhood asthma and allergy in Alpine farm environments—the GABRIEL Advanced Studies

(2012) Sabina Illi et al.   JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY

A microbiota signature associated with experimental food allergy promotes allergic sensitization and anaphylaxis

(2012) Magali Noval Rivas et al.   JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY

Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies

(2012) Anna Klindworth et al.   NUCLEIC ACIDS RESEARCH

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Human Occupancy as a Source of Indoor Airborne Bacteria

(2012) Denina Hospodsky et al.   PLoS One

Primary biological aerosol particles in the atmosphere: a review

(2012) VivianeR. Després et al.   TELLUS SERIES B-CHEMICAL AND PHYSICAL METEOROLOGY

Sources of Bacteria in Outdoor Air across Cities in the Midwestern United States

(2011) Robert M. Bowers et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

Exposure to inhalable dust and endotoxin among Danish livestock farmers: results from the SUS cohort study

(2011) Ioannis Basinas et al.   JOURNAL OF ENVIRONMENTAL MONITORING

Exposure to Environmental Microorganisms and Childhood Asthma

(2011) Markus J. Ege et al.   NEW ENGLAND JOURNAL OF MEDICINE

Spatial variability in airborne bacterial communities across land-use types and their relationship to the bacterial communities of potential source environments

(2010) Robert M Bowers et al.   ISME Journal

Airway microbiota and bronchial hyperresponsiveness in patients with suboptimally controlled asthma

(2010) Yvonne J. Huang et al.   JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY

Disordered Microbial Communities in Asthmatic Airways

(2010) Markus Hilty et al.   PLoS One

Inducible Foxp3+ regulatory T-cell development by a commensal bacterium of the intestinal microbiota

(2010) J. L. Round et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The cohort of young Danish farmers – A longitudinal study of the health effects of farming exposure

(2010) Elholm   Clinical Epidemiology

Culture-Independent Characterization of Archaeal Biodiversity in Swine Confinement Building Bioaerosols

(2009) B. Nehme et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Chronic Bronchitis, COPD, and Lung Function in Farmers

(2009) Wijnand Eduard et al.   CHEST

Lactobacillus reuteri–induced Regulatory T cells Protect against an Allergic Airway Response in Mice

(2008) Khalil Karimi et al.   AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE

Evaluation of a Low-Cost Electrostatic Dust Fall Collector for Indoor Air Endotoxin Exposure Assessment

(2008) I. Noss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Culture-independent approach of the bacterial bioaerosol diversity in the standard swine confinement buildings, and assessment of the seasonal effect

(2008) Benjamin Nehme et al.   ENVIRONMENTAL MICROBIOLOGY

Predominance of Gram-positive bacteria in house dust in the low-allergy risk Russian Karelia

(2008) Jaakko Pakarinen et al.   ENVIRONMENTAL MICROBIOLOGY