A genomic update on clostridial phylogeny: Gram-negative spore formers and other misplaced clostridia

Genomic determinants of sporulation inBacilliandClostridia: towards the minimal set of sporulation-specific genes

(2012) Michael Y. Galperin et al.   ENVIRONMENTAL MICROBIOLOGY

Draft Genome Sequences for Two Metal-Reducing Pelosinus fermentans Strains Isolated from a Cr(VI)-Contaminated Site and for Type Strain R7

(2012) Steven D. Brown et al.   JOURNAL OF BACTERIOLOGY

Draft Genome Sequence of Pelosinus fermentans JBW45, Isolated during In Situ Stimulation for Cr(VI) Reduction

(2012) K. Bowen De Leon et al.   JOURNAL OF BACTERIOLOGY

The International Nucleotide Sequence Database Collaboration

(2012) Y. Nakamura et al.   NUCLEIC ACIDS RESEARCH

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Phylogenomics of Prokaryotic Ribosomal Proteins

(2012) Natalya Yutin et al.   PLoS One

The Purine-Utilizing Bacterium Clostridium acidurici 9a: A Genome-Guided Metabolic Reconsideration

(2012) Katrin Hartwich et al.   PLoS One

Complete Genome Sequence of Clostridium clariflavum DSM 19732

(2012) Javier A. Izquierdo et al.   Standards in Genomic Sciences

Peptidoglycan Remodeling and Conversion of an Inner Membrane into an Outer Membrane during Sporulation

(2011) Elitza I. Tocheva et al.   CELL

An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea

(2011) Daniel McDonald et al.   ISME Journal

Genome Sequence of the Ruminal Bacterium Megasphaera elsdenii

(2011) H. Marx et al.   JOURNAL OF BACTERIOLOGY

The Genome of Erysipelothrix rhusiopathiae, the Causative Agent of Swine Erysipelas, Reveals New Insights into the Evolution of Firmicutes and the Organism's Intracellular Adaptations

(2011) Y. Ogawa et al.   JOURNAL OF BACTERIOLOGY

Cadaverine Covalently Linked to the Peptidoglycan Serves as the Correct Constituent for the Anchoring Mechanism between the Outer Membrane and Peptidoglycan in Selenomonas ruminantium

(2011) S. Kojima et al.   JOURNAL OF BACTERIOLOGY

The NCBI Taxonomy database

(2011) S. Federhen   NUCLEIC ACIDS RESEARCH

NCBI Reference Sequences (RefSeq): current status, new features and genome annotation policy

(2011) K. D. Pruitt et al.   NUCLEIC ACIDS RESEARCH

Hierarchical Evolution of the Bacterial Sporulation Network

(2010) Michiel J.L. de Hoon et al.   CURRENT BIOLOGY

Clostridial spore germination versus bacilli: Genome mining and current insights

(2010) Yinghua Xiao et al.   FOOD MICROBIOLOGY

Sequencing of Multiple Clostridial Genomes Related to Biomass Conversion and Biofuel Production

(2010) C. L. Hemme et al.   JOURNAL OF BACTERIOLOGY

En route to a genome-based classification of Archaea and Bacteria?

(2010) H.-P. Klenk et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

A phylum level perspective on bacterial cell envelope architecture

(2010) Iain C. Sutcliffe   TRENDS IN MICROBIOLOGY

Complete genome sequence of Acidaminococcus fermentans type strain (VR4T)

(2010) Yun-Juan Chang et al.   Standards in Genomic Sciences

Complete genome sequence of Veillonella parvula type strain (Te3T)

(2010) Sabine Gronow et al.   Standards in Genomic Sciences

Phylogenomic analyses of clostridia and identification of novel protein signatures that are specific to the genus Clostridium sensu stricto (cluster I)

(2009) R. S. Gupta et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Proteocatella sphenisci gen. nov., sp. nov., a psychrotolerant, spore-forming anaerobe isolated from penguin guano

(2009) E. V. Pikuta et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Negativicoccus succinicivorans gen. nov., sp. nov., isolated from human clinical samples, emended description of the family Veillonellaceae and description of Negativicutes classis nov., Selenomonadales ord. nov. and Acidaminococcaceae fam. nov. in the bacterial phylum Firmicutes

(2009) H. Marchandin et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Cellulosilyticum ruminicola gen. nov., sp. nov., isolated from the rumen of yak, and reclassification of Clostridium lentocellum as Cellulosilyticum lentocellum comb. nov.

(2009) S. Cai et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Proposal to unify Clostridium orbiscindens Winter et al. 1991 and Eubacterium plautii (Seguin 1928) Hofstad and Aasjord 1982, with description of Flavonifractor plautii gen. nov., comb. nov., and reassignment of Bacteroides capillosus to Pseudoflavonifractor capillosus gen. nov., comb. nov.

(2009) J.-P. Carlier et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Clostridium lavalense sp. nov., a glycopeptide-resistant species isolated from human faeces

(2009) M.-C. Domingo et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Clostridium clariflavum sp. nov. and Clostridium caenicola sp. nov., moderately thermophilic, cellulose-/cellobiose-digesting bacteria isolated from methanogenic sludge

(2009) H. Shiratori et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Proteomic and Genomic Characterization of Highly Infectious Clostridium difficile 630 Spores

(2009) T. D. Lawley et al.   JOURNAL OF BACTERIOLOGY

The Ribosomal Database Project: improved alignments and new tools for rRNA analysis

(2008) J. R. Cole et al.   NUCLEIC ACIDS RESEARCH