High Throughput Sequencing and Network Analysis Disentangle the Microbial Communities of Ticks and Hosts Within and Between Ecosystems

Transient influence of blood meal and natural environment on blacklegged tick bacterial communities

(2018) Christine P. Zolnik et al.   Ticks and Tick-Borne Diseases

Emerging borreliae – Expanding beyond Lyme borreliosis

(2017) Sally J. Cutler et al.   MOLECULAR AND CELLULAR PROBES

On the core bacterial flora of Ixodes persulcatus (Taiga tick)

(2017) Shuo Sui et al.   PLoS One

Pathogen-mediated manipulation of arthropod microbiota to promote infection

(2017) Nabil M. Abraham et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Tick microbiome and pathogen acquisition altered by host blood meal

(2016) Andrea Swei et al.   ISME Journal

Microbiome changes through ontogeny of a tick pathogen vector

(2016) Christine P. Zolnik et al.   MOLECULAR ECOLOGY

Co-infection of Ticks: The Rule Rather Than the Exception

(2016) Sara Moutailler et al.   PLoS Neglected Tropical Diseases

16S rRNA Amplicon Sequencing for Epidemiological Surveys of Bacteria in Wildlife

(2016) Maxime Galan et al.   mSystems

Variation in the Microbiota of Ixodes Ticks with Regard to Geography, Species, and Sex

(2015) Will Van Treuren et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Concordance of bacterial communities of two tick species and blood of their shared rodent host

(2015) Evelyn C. Rynkiewicz et al.   MOLECULAR ECOLOGY

Tick microbiome: the force within

(2015) Sukanya Narasimhan et al.   TRENDS IN PARASITOLOGY

NGS population genetics analyses reveal divergent evolution of a Lyme Borreliosis agent in Europe and Asia

(2015) Fanny Gatzmann et al.   Ticks and Tick-Borne Diseases

Interactions between tick and transmitted pathogens evolved to minimise competition through nested and coherent networks

(2015) Agustín Estrada-Peña et al.   Scientific Reports

Does the Arthropod Microbiota Impact the Establishment of Vector-Borne Diseases in Mammalian Hosts?

(2015) Constance A. M. Finney et al.   PLoS Pathogens

Conducting a Microbiome Study

(2014) Julia K. Goodrich et al.   CELL

Gut Microbiota of the Tick Vector Ixodes scapularis Modulate Colonization of the Lyme Disease Spirochete

(2014) Sukanya Narasimhan et al.   Cell Host & Microbe

The composition and transmission of microbiome in hard tick, Ixodes persulcatus, during blood meal

(2014) Xue-Chao Zhang et al.   Ticks and Tick-Borne Diseases

Development of a Dual-Index Sequencing Strategy and Curation Pipeline for Analyzing Amplicon Sequence Data on the MiSeq Illumina Sequencing Platform

(2013) James J. Kozich et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

A novel approach, based on BLSOMs (Batch Learning Self-Organizing Maps), to the microbiome analysis of ticks

(2013) Ryo Nakao et al.   ISME Journal

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

Centrality in primate-parasite networks reveals the potential for the transmission of emerging infectious diseases to humans

(2013) J. M. Gomez et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Surveying the Microbiome of Ants: Comparing 454 Pyrosequencing with Traditional Methods To Uncover Bacterial Diversity

(2012) Stefanie Kautz et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Hypothesis Testing and Power Calculations for Taxonomic-Based Human Microbiome Data

(2012) Patricio S. La Rosa et al.   PLoS One

Using network analysis to explore co-occurrence patterns in soil microbial communities

(2011) Albert Barberán et al.   ISME Journal

Landscape genetics highlights the role of bank vole metapopulation dynamics in the epidemiology of Puumala hantavirus

(2011) E. GUIVIER et al.   MOLECULAR ECOLOGY

Metagenomic Profile of the Bacterial Communities Associated with Ixodes ricinus Ticks

(2011) Giovanna Carpi et al.   PLoS One

A global network of coexisting microbes from environmental and whole-genome sequence data

(2010) S. Chaffron et al.   GENOME RESEARCH

UniFrac: an effective distance metric for microbial community comparison

(2010) Catherine Lozupone et al.   ISME Journal

The large-scale organization of the bacterial network of ecological co-occurrence interactions

(2010) Shiri Freilich et al.   NUCLEIC ACIDS RESEARCH

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

A Wolbachia Symbiont in Aedes aegypti Limits Infection with Dengue, Chikungunya, and Plasmodium

(2009) Luciano A. Moreira et al.   CELL