Origin and evolution of the nuclear auxin response system

Evolution of nuclear auxin signaling: lessons from genetic studies with basal land plants

(2017) Hirotaka Kato et al.   JOURNAL OF EXPERIMENTAL BOTANY

TimeTree: A Resource for Timelines, Timetrees, and Divergence Times

(2017) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

Why we need more non-seed plant models

(2017) Stefan A. Rensing   NEW PHYTOLOGIST

The Roles of the Sole Activator-Type Auxin Response Factor in Pattern Formation of Marchantia polymorpha

(2017) Hirotaka Kato et al.   PLANT AND CELL PHYSIOLOGY

Primitive Auxin Response without TIR1 and Aux/IAA in the Charophyte Alga Klebsormidium nitens

(2017) Kinuka Ohtaka et al.   PLANT PHYSIOLOGY

Control of cytokinin and auxin homeostasis in cyanobacteria and algae

(2016) Eva Žižková et al.   ANNALS OF BOTANY

Transcriptional Responses to the Auxin Hormone

(2016) Dolf Weijers et al.   Annual Review of Plant Biology

Constitutive auxin response in Physcomitrella reveals complex interactions between Aux/IAA and ARF proteins

(2016) Meirav Lavy et al.   eLife

Establishment of Anthoceros agrestis as a model species for studying the biology of hornworts

(2015) Péter Szövényi et al.   BMC PLANT BIOLOGY

Interaction and signalling between a cosmopolitan phytoplankton and associated bacteria

(2015) S. A. Amin et al.   NATURE

Auxin Produced by the Indole-3-Pyruvic Acid Pathway Regulates Development and Gemmae Dormancy in the LiverwortMarchantia polymorpha

(2015) D. Magnus Eklund et al.   PLANT CELL

Protocol: genetic transformation of the fern Ceratopteris richardii through microparticle bombardment

(2015) Andrew R G Plackett et al.   Plant Methods

Genetic control of distal stem cell fate within root and embryonic meristems

(2015) B. C. W. Crawford et al.   SCIENCE

Auxin-Mediated Transcriptional System with a Minimal Set of Components Is Critical for Morphogenesis through the Life Cycle in Marchantia polymorpha

(2015) Hirotaka Kato et al.   PLoS Genetics

A Simple Auxin Transcriptional Response System Regulates Multiple Morphogenetic Processes in the Liverwort Marchantia polymorpha

(2015) Eduardo Flores-Sandoval et al.   PLoS Genetics

Identification of Reference Genes for Real-Time Quantitative PCR Experiments in the Liverwort Marchantia polymorpha

(2015) Denis Saint-Marcoux et al.   PLoS One

Development of Gateway Binary Vector Series with Four Different Selection Markers for the Liverwort Marchantia polymorpha

(2015) Kimitsune Ishizaki et al.   PLoS One

RAV genes: regulation of floral induction and beyond

(2014) Luis Matías-Hernández et al.   ANNALS OF BOTANY

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

(2014) Alexandros Stamatakis   BIOINFORMATICS

Structural Basis for DNA Binding Specificity by the Auxin-Dependent ARF Transcription Factors

(2014) D. Roeland Boer et al.   CELL

CRISPR/Cas9-Mediated Targeted Mutagenesis in the Liverwort Marchantia polymorpha L.

(2014) Shigeo S. Sugano et al.   PLANT AND CELL PHYSIOLOGY

Molecular basis for AUXIN RESPONSE FACTOR protein interaction and the control of auxin response repression

(2014) D. A. Korasick et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Structural basis for oligomerization of auxin transcriptional regulators

(2014) Max H. Nanao et al.   Nature Communications

Klebsormidium flaccidum genome reveals primary factors for plant terrestrial adaptation

(2014) Koichi Hori et al.   Nature Communications

Protein-protein interaction and gene co-expression maps of ARFs and Aux/IAAs in Arabidopsis

(2014) Sarbottam Piya et al.   Frontiers in Plant Science

Data access for the 1,000 Plants (1KP) project

(2014) Naim Matasci et al.   GigaScience

EfficientAgrobacterium-Mediated Transformation of the LiverwortMarchantia polymorphaUsing Regenerating Thalli

(2013) Akane KUBOTA et al.   BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

AUXIN RESPONSE FACTOR17 Is Essential for Pollen Wall Pattern Formation in Arabidopsis

(2013) J. Yang et al.   PLANT PHYSIOLOGY

Visualization of auxin-mediated transcriptional activation using a common auxin-responsive reporter system in the liverwort Marchantia polymorpha

(2012) Kimitsune Ishizaki et al.   JOURNAL OF PLANT RESEARCH

Evolution of the ARF Gene Family in Land Plants: Old Domains, New Tricks

(2012) Cédric Finet et al.   MOLECULAR BIOLOGY AND EVOLUTION

PartitionFinder: Combined Selection of Partitioning Schemes and Substitution Models for Phylogenetic Analyses

(2012) R. Lanfear et al.   MOLECULAR BIOLOGY AND EVOLUTION

Ancestral polyploidy in seed plants and angiosperms

(2011) Yuannian Jiao et al.   NATURE

ABP1 Mediates Auxin Inhibition of Clathrin-Dependent Endocytosis in Arabidopsis

(2010) Stéphanie Robert et al.   CELL

Physcomitrella patens Auxin-Resistant Mutants Affect Conserved Elements of an Auxin-Signaling Pathway

(2010) Michael J. Prigge et al.   CURRENT BIOLOGY

Jasmonate perception by inositol-phosphate-potentiated COI1–JAZ co-receptor

(2010) Laura B. Sheard et al.   NATURE

Dynamics of auxin-dependent Ca2+ and pH signaling in root growth revealed by integrating high-resolution imaging with automated computer vision-based analysis

(2010) Gabriele B. Monshausen et al.   PLANT JOURNAL

The role of floral organs in carpels, an Arabidopsis loss-of-function mutation in MicroRNA160a, in organogenesis and the mechanism regulating its expression

(2010) Xiaodong Liu et al.   PLANT JOURNAL

Rapid Auxin-Induced Cell Expansion and Gene Expression: A Four-Decade-Old Question Revisited

(2010) D. Schenck et al.   PLANT PHYSIOLOGY

Auxin regulates distal stem cell differentiation in Arabidopsis roots

(2010) Z. Ding et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Transcript profiling reveals diverse roles of auxin-responsive genes during reproductive development and abiotic stress in rice

(2009) Mukesh Jain et al.   FEBS Journal

Genome-wide analysis of the auxin-responsive transcriptome downstream of iaa1 and its expression analysis reveal the diversity and complexity of auxin-regulated gene expression

(2009) Dong Ju Lee et al.   JOURNAL OF EXPERIMENTAL BOTANY

Comprehensive Transcriptome Analysis of Auxin Responses in Arabidopsis

(2008) Ivan A. Paponov et al.   Molecular Plant

COI1 is a critical component of a receptor for jasmonate and the bacterial virulence factor coronatine

(2008) L. Katsir et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

TOPLESS Mediates Auxin-Dependent Transcriptional Repression During Arabidopsis Embryogenesis

(2008) H. Szemenyei et al.   SCIENCE