Synchronous termination of replication of the two chromosomes is an evolutionary selected feature in Vibrionaceae

Random versus Cell Cycle-Regulated Replication Initiation in Bacteria: Insights from Studying Vibrio cholerae Chromosome 2

(2016) Revathy Ramachandran et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Design and Assembly of DNA Sequence Libraries for Chromosomal Insertion in Bacteria Based on a Set of Modified MoClo Vectors

(2016) Daniel Schindler et al.   ACS Synthetic Biology

DNA Replication in Engineered Escherichia coli Genomes with Extra Replication Origins

(2016) Sarah Milbredt et al.   ACS Synthetic Biology

DistAMo: A Web-Based Tool to Characterize DNA-Motif Distribution on Bacterial Chromosomes

(2016) Patrick Sobetzko et al.   Frontiers in Microbiology

A checkpoint control orchestrates the replication of the two chromosomes of Vibrio cholerae

(2016) M.-E. Val et al.   Science Advances

Choreography of the Mycobacterium Replication Machinery during the Cell Cycle

(2015) Damian Trojanowski et al.   mBio

Molecular Dissection of the Essential Features of the Origin of Replication of the Second Vibrio cholerae Chromosome

(2015) Matthew A. Gerding et al.   mBio

Dynamic Organization: Chromosome Domains in Escherichia coli

(2015) Sonja Julia Messerschmidt et al.   JOURNAL OF MOLECULAR MICROBIOLOGY AND BIOTECHNOLOGY

Prokka: rapid prokaryotic genome annotation

(2014) T. Seemann   BIOINFORMATICS

Management of multipartite genomes: the Vibrio cholerae model

(2014) Marie-Eve Val et al.   CURRENT OPINION IN MICROBIOLOGY

Large Chromosomal Rearrangements during a Long-Term Evolution Experiment with Escherichia coli

(2014) C. Raeside et al.   mBio

The Two Cis-Acting Sites, parS1 and oriC1, Contribute to the Longitudinal Organisation of Vibrio cholerae Chromosome I

(2014) Ariane David et al.   PLoS Genetics

Differential Management of the Replication Terminus Regions of the Two Vibrio cholerae Chromosomes during Cell Division

(2014) Gaëlle Demarre et al.   PLoS Genetics

Chromosome I Controls Chromosome II Replication in Vibrio cholerae

(2014) Jong Hwan Baek et al.   PLoS Genetics

Fuse or die: how to survive the loss of Dam inVibrio cholerae

(2013) Marie-Eve Val et al.   MOLECULAR MICROBIOLOGY

Accelerated growth in the absence of DNA replication origins

(2013) Michelle Hawkins et al.   NATURE

High-resolution definition of the Vibrio cholerae essential gene set with hidden Markov model–based analyses of transposon-insertion sequencing data

(2013) Michael C. Chao et al.   NUCLEIC ACIDS RESEARCH

Chromosome dynamics in multichromosome bacteria

(2012) Jyoti K. Jha et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

A MatP-divisome interaction coordinates chromosome segregation with cell division inE. coli

(2012) Olivier Espéli et al.   EMBO JOURNAL

Molecular Basis for a Protein-Mediated DNA-Bridging Mechanism that Functions in Condensation of the E. coli Chromosome

(2012) Pauline Dupaigne et al.   MOLECULAR CELL

Replication fork movement and methylation govern SeqA binding to the Escherichia coli chromosome

(2012) Torsten Waldminghaus et al.   NUCLEIC ACIDS RESEARCH

DoriC 5.0: an updated database of oriC regions in both bacterial and archaeal genomes

(2012) Feng Gao et al.   NUCLEIC ACIDS RESEARCH

Replication regulation of Vibrio cholerae chromosome II involves initiator binding to the origin both as monomer and as dimer

(2012) Jyoti K. Jha et al.   NUCLEIC ACIDS RESEARCH

rctB mutations that increase copy number of Vibrio cholerae oriCII in Escherichia coli

(2012) Birgit Koch et al.   PLASMID

Insensitivity of Chromosome I and the Cell Cycle to Blockage of Replication and Segregation of Vibrio cholerae Chromosome II

(2012) R. Kadoya et al.   mBio

AdpA, key regulator for morphological differentiation regulates bacterial chromosome replication

(2012) M. Wolanski et al.   Open Biology

Genome-wide detection of chromosomal rearrangements, indels, and mutations in circular chromosomes by short read sequencing

(2011) Ole Skovgaard et al.   GENOME RESEARCH

Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega

(2011) F. Sievers et al.   Molecular Systems Biology

A Modular Cloning System for Standardized Assembly of Multigene Constructs

(2011) Ernst Weber et al.   PLoS One

Transition from a plasmid to a chromosomal mode of replication entails additional regulators

(2011) T. Venkova-Canova et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

(2010) A. McKenna et al.   GENOME RESEARCH

Replication of Vibrio cholerae Chromosome I in Escherichia coli: Dependence on Dam Methylation

(2010) B. Koch et al.   JOURNAL OF BACTERIOLOGY

Replication patterns and organization of replication forks in Vibrio cholerae

(2010) C. Stokke et al.   MICROBIOLOGY-SGM

DNA Adenine Methylation Is Required to Replicate Both Vibrio cholerae Chromosomes Once per Cell Cycle

(2010) Gaëlle Demarre et al.   PLoS Genetics

VarScan: variant detection in massively parallel sequencing of individual and pooled samples

(2009) Daniel C. Koboldt et al.   BIOINFORMATICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Cell cycle synchronization of Escherichia coli using the stringent response, with fluorescence labeling assays for DNA content and replication

(2009) Daniel J. Ferullo et al.   METHODS

Enzymatic assembly of DNA molecules up to several hundred kilobases

(2009) Daniel G Gibson et al.   NATURE METHODS

Delayed activation of Xer recombination at dif by FtsK during septum assembly in Escherichia coli

(2008) Sean P. Kennedy et al.   MOLECULAR MICROBIOLOGY

Dynamics of Genome Rearrangement in Bacterial Populations

(2008) Aaron E. Darling et al.   PLoS Genetics