Community-based benchmarking improves spike rate inference from two-photon calcium imaging data

Fast online deconvolution of calcium imaging data

(2017) Johannes Friedrich et al.   PLoS Computational Biology

Benchmarking Spike Rate Inference in Population Calcium Imaging

(2016) Lucas Theis et al.   NEURON

Simultaneous Denoising, Deconvolution, and Demixing of Calcium Imaging Data

(2016) Eftychios A. Pnevmatikakis et al.   NEURON

Accurate spike estimation from noisy calcium signals for ultrafast three-dimensional imaging of large neuronal populations in vivo

(2016) Thomas Deneux et al.   Nature Communications

Open source tools for large-scale neuroscience

(2015) Jeremy Freeman   CURRENT OPINION IN NEUROBIOLOGY

Comprehensive imaging of cortical networks

(2015) Simon Peron et al.   CURRENT OPINION IN NEUROBIOLOGY

ImageNet Large Scale Visual Recognition Challenge

(2015) Olga Russakovsky et al.   INTERNATIONAL JOURNAL OF COMPUTER VISION

Information-theoretic model comparison unifies saliency metrics

(2015) Matthias Kümmerer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Photon Shot Noise Limits on Optical Detection of Neuronal Spikes and Estimation of Spike Timing

(2013) Brian A. Wilt et al.   BIOPHYSICAL JOURNAL

Ultrasensitive fluorescent proteins for imaging neuronal activity

(2013) Tsai-Wen Chen et al.   NATURE

Three-dimensional mapping of microcircuit correlation structure

(2013) R. James Cotton et al.   Frontiers in Neural Circuits

Fast Nonnegative Deconvolution for Spike Train Inference From Population Calcium Imaging

(2010) Joshua T. Vogelstein et al.   JOURNAL OF NEUROPHYSIOLOGY

High-speed in vivo calcium imaging reveals neuronal network activity with near-millisecond precision

(2010) Benjamin F Grewe et al.   NATURE METHODS

Spike Inference from Calcium Imaging Using Sequential Monte Carlo Methods

(2009) Joshua T. Vogelstein et al.   BIOPHYSICAL JOURNAL

Fast and Accurate Detection of Action Potentials From Somatic Calcium Fluctuations

(2008) Takuya Sasaki et al.   JOURNAL OF NEUROPHYSIOLOGY

Population imaging of ongoing neuronal activity in the visual cortex of awake rats

(2008) David S Greenberg et al.   NATURE NEUROSCIENCE

Imaging in vivo: watching the brain in action

(2008) Jason N. D. Kerr et al.   NATURE REVIEWS NEUROSCIENCE