Systematic and stochastic influences on the performance of the MinION nanopore sequencer across a range of nucleotide bias
Published 2018 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Systematic and stochastic influences on the performance of the MinION nanopore sequencer across a range of nucleotide bias
Authors
Keywords
-
Journal
Scientific Reports
Volume 8, Issue 1, Pages -
Publisher
Springer Nature
Online
2018-02-12
DOI
10.1038/s41598-018-21484-w
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Same-Day Diagnostic and Surveillance Data for Tuberculosis via Whole-Genome Sequencing of Direct Respiratory Samples
- (2017) Antonina A. Votintseva et al. JOURNAL OF CLINICAL MICROBIOLOGY
- Mapping DNA methylation with high-throughput nanopore sequencing
- (2017) Arthur C Rand et al. NATURE METHODS
- Multiplex PCR method for MinION and Illumina sequencing of Zika and other virus genomes directly from clinical samples
- (2017) Joshua Quick et al. Nature Protocols
- De Novo Assembly of a NewSolanum pennelliiAccession Using Nanopore Sequencing
- (2017) Maximilian H.-W. Schmidt et al. PLANT CELL
- High-Quality de Novo Genome Assembly of the Dekkera bruxellensis Yeast Using Nanopore MinION Sequencing
- (2017) Téo Fournier et al. G3-Genes Genomes Genetics
- Rapid de novo assembly of the European eel genome from nanopore sequencing reads
- (2017) Hans J. Jansen et al. Scientific Reports
- Real-time, portable genome sequencing for Ebola surveillance
- (2016) Joshua Quick et al. NATURE
- Real-time selective sequencing using nanopore technology
- (2016) Matthew Loose et al. NATURE METHODS
- Benchmarking of the Oxford Nanopore MinION sequencing for quantitative and qualitative assessment of cDNA populations
- (2016) Spyros Oikonomopoulos et al. Scientific Reports
- Genome assembly using Nanopore-guided long and error-free DNA reads
- (2015) Mohammed-Amin Madoui et al. BMC GENOMICS
- Oxford Nanopore sequencing, hybrid error correction, and de novo assembly of a eukaryotic genome
- (2015) Sara Goodwin et al. GENOME RESEARCH
- Comprehensive transcriptome analysis using synthetic long-read sequencing reveals molecular co-association of distant splicing events
- (2015) Hagen Tilgner et al. NATURE BIOTECHNOLOGY
- Assembling large genomes with single-molecule sequencing and locality-sensitive hashing
- (2015) Konstantin Berlin et al. NATURE BIOTECHNOLOGY
- Improved data analysis for the MinION nanopore sequencer
- (2015) Miten Jain et al. NATURE METHODS
- Scaffolding of a bacterial genome using MinION nanopore sequencing
- (2015) E. Karlsson et al. Scientific Reports
- Rapid metagenomic identification of viral pathogens in clinical samples by real-time nanopore sequencing analysis
- (2015) Alexander L. Greninger et al. Genome Medicine
- MinION nanopore sequencing of an influenza genome
- (2015) Jing Wang Frontiers in Microbiology
- PacBio Sequencing and Its Applications
- (2015) Anthony Rhoads et al. GENOMICS PROTEOMICS & BIOINFORMATICS
- Effects of GC Bias in Next-Generation-Sequencing Data on De Novo Genome Assembly
- (2013) Yen-Chun Chen et al. PLoS One
- Characterizing and measuring bias in sequence data
- (2013) Michael G Ross et al. GENOME BIOLOGY
- Summarizing and correcting the GC content bias in high-throughput sequencing
- (2012) Yuval Benjamini et al. NUCLEIC ACIDS RESEARCH
- Analyzing and minimizing PCR amplification bias in Illumina sequencing libraries
- (2011) Daniel Aird et al. GENOME BIOLOGY
- Fast and accurate long-read alignment with Burrows–Wheeler transform
- (2010) Heng Li et al. BIOINFORMATICS
- BEDTools: a flexible suite of utilities for comparing genomic features
- (2010) Aaron R. Quinlan et al. BIOINFORMATICS
- Direct detection of DNA methylation during single-molecule, real-time sequencing
- (2010) Benjamin A Flusberg et al. NATURE METHODS
- The Sequence Alignment/Map format and SAMtools
- (2009) H. Li et al. BIOINFORMATICS
- Real-Time DNA Sequencing from Single Polymerase Molecules
- (2008) J. Eid et al. SCIENCE
Become a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get StartedAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started