Strong selection during the last millennium for African ancestry in the admixed population of Madagascar

Genomic landscape of human diversity across Madagascar

(2017) Denis Pierron et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Population genetic analysis of the DARC locus (Duffy) reveals adaptation from standing variation associated with malaria resistance in humans

(2017) Kimberly F. McManus et al.   PLoS Genetics

Introgression of Neandertal- and Denisovan-like Haplotypes Contributes to Adaptive Variation in Human Toll-like Receptors

(2016) Michael Dannemann et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Global Epidemiology of Plasmodium vivax

(2016) Rosalind E. Howes et al.   AMERICAN JOURNAL OF TROPICAL MEDICINE AND HYGIENE

The Genetic Cost of Neanderthal Introgression

(2016) Kelley Harris et al.   GENETICS

Wide distribution and altitude correlation of an archaic high-altitude-adaptive EPAS1 haplotype in the Himalayas

(2016) Sophie Hackinger et al.   HUMAN GENETICS

Ancient crops provide first archaeological signature of the westward Austronesian expansion

(2016) Alison Crowther et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Strong Selection at MHC in Mexicans since Admixture

(2016) Quan Zhou et al.   PLoS Genetics

The Genetic Cost of Neanderthal Introgression

(2016) Kelley Harris et al.   GENETICS

Accurate Non-parametric Estimation of Recent Effective Population Size from Segments of Identity by Descent

(2015) Sharon R. Browning et al.   AMERICAN JOURNAL OF HUMAN GENETICS

A global reference for human genetic variation

(2015) Richard A. Gibbs et al.   NATURE

Plasmodium vivax Diversity and Population Structure across Four Continents

(2015) Cristian Koepfli et al.   PLoS Neglected Tropical Diseases

Plasmodium vivax Transmission in Africa

(2015) Rosalind E. Howes et al.   PLoS Neglected Tropical Diseases

Second-generation PLINK: rising to the challenge of larger and richer datasets

(2015) Christopher C Chang et al.   GigaScience

Genome-wide Scan of 29,141 African Americans Finds No Evidence of Directional Selection since Admixture

(2014) Gaurav Bhatia et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Detecting Structure of Haplotypes and Local Ancestry

(2014) Y. Guan   GENETICS

Inferring human population size and separation history from multiple genome sequences

(2014) Stephan Schiffels et al.   NATURE GENETICS

Genome-wide evidence of Austronesian-Bantu admixture and cultural reversion in a hunter-gatherer group of Madagascar

(2014) D. Pierron et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Natural selection for the Duffy-null allele in the recently admixed people of Madagascar

(2014) J. A. Hodgson et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

A Genetic Atlas of Human Admixture History

(2014) G. Hellenthal et al.   SCIENCE

Helminth Allergens, Parasite-Specific IgE, and Its Protective Role in Human Immunity

(2014) Colin Matthew Fitzsimmons et al.   Frontiers in Immunology

RFMix: A Discriminative Modeling Approach for Rapid and Robust Local-Ancestry Inference

(2013) Brian K. Maples et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Phenotype–Genotype Integrator (PheGenI): synthesizing genome-wide association study (GWAS) data with existing genomic resources

(2013) Erin M Ramos et al.   EUROPEAN JOURNAL OF HUMAN GENETICS

African Ancestry is a Risk Factor for Asthma and High Total IgE Levels in African Admixed Populations

(2013) Candelaria Vergara et al.   GENETIC EPIDEMIOLOGY

Inferring Admixture Histories of Human Populations Using Linkage Disequilibrium

(2013) P.-R. Loh et al.   GENETICS

DifferentFCER1Apolymorphisms influence IgE levels in asthmatics and non-asthmatics

(2013) Daniel P. Potaczek et al.   PEDIATRIC ALLERGY AND IMMUNOLOGY

Genome-wide Association and Population Genetic Analysis of C-Reactive Protein in African American and Hispanic American Women

(2012) Alex P. Reiner et al.   AMERICAN JOURNAL OF HUMAN GENETICS

PCAdmix: Principal Components-Based Assignment of Ancestry Along Each Chromosome in Individuals with Admixed Ancestry from Two or More Populations

(2012) Abra Brisbin et al.   HUMAN BIOLOGY

The variant call format and VCFtools

(2011) P. Danecek et al.   BIOINFORMATICS

Genome-wide detection of natural selection in African Americans pre- and post-admixture

(2011) W. Jin et al.   GENOME RESEARCH

A linear complexity phasing method for thousands of genomes

(2011) Olivier Delaneau et al.   NATURE METHODS

The Origins of African Plasmodium vivax; Insights from Mitochondrial Genome Sequencing

(2011) Richard Culleton et al.   PLoS One

The global distribution of the Duffy blood group

(2011) Rosalind E. Howes et al.   Nature Communications

Plasmodium vivax clinical malaria is commonly observed in Duffy-negative Malagasy people

(2010) D. Menard et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Fast model-based estimation of ancestry in unrelated individuals

(2009) D. H. Alexander et al.   GENOME RESEARCH

Reduced Neutrophil Count in People of African Descent Is Due To a Regulatory Variant in the Duffy Antigen Receptor for Chemokines Gene

(2009) David Reich et al.   PLoS Genetics

Geohelminth infections: a review of the role of IgE and assessment of potential risks of anti-IgE treatment

(2008) P. J. Cooper et al.   ALLERGY