Reconstruction of the diapsid ancestral genome permits chromosome evolution tracing in avian and non-avian dinosaurs

Low diversity, activity, and density of transposable elements in five avian genomes

(2017) Bo Gao et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

A new hypothesis of dinosaur relationships and early dinosaur evolution

(2017) Matthew G. Baron et al.   NATURE

Dynamics of genome size evolution in birds and mammals

(2017) Aurélie Kapusta et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genomic Signature of an Avian Lilliput Effect across the K-Pg Extinction

(2017) Jacob S. Berv et al.   SYSTEMATIC BIOLOGY

Identification, chromosomal arrangements and expression analyses of the evolutionarily conserved prmt1 gene in chicken in comparison with its vertebrate paralogue prmt8

(2017) Yi-Chun Wang et al.   PLoS One

A new look at the LTR retrotransposon content of the chicken genome

(2016) Andrew S. Mason et al.   BMC GENOMICS

Novel Insights into Chromosome Evolution in Birds, Archosaurs, and Reptiles

(2016) Marta Farré et al.   Genome Biology and Evolution

Upgrading short-read animal genome assemblies to chromosome level using comparative genomics and a universal probe set

(2016) Joana Damas et al.   GENOME RESEARCH

Reconstruction of Ancestral Genomes in Presence of Gene Gain and Loss

(2016) Pavel Avdeyev et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

A New Chicken Genome Assembly Provides Insight into Avian Genome Structure

(2016) Wesley C. Warren et al.   G3-Genes Genomes Genetics

High-Resolution Mapping of Crossover and Non-crossover Recombination Events by Whole-Genome Re-sequencing of an Avian Pedigree

(2016) Linnéa Smeds et al.   PLoS Genetics

How Many Kinds of Birds Are There and Why Does It Matter?

(2016) George F. Barrowclough et al.   PLoS One

Physical Mapping and Refinement of the Painted Turtle Genome (Chrysemys picta) Inform Amniote Genome Evolution and Challenge Turtle-Bird Chromosomal Conservation

(2015) Daleen Badenhorst et al.   Genome Biology and Evolution

Response to Comment on "Whole-genome analyses resolve early branches in the tree of life of modern birds"

(2015) J. Cracraft et al.   SCIENCE

Reconstruction of gross avian genome structure, organization and evolution suggests that the chicken lineage most closely resembles the dinosaur avian ancestor

(2014) Michael N Romanov et al.   BMC GENOMICS

A high-density linkage map enables a second-generation collared flycatcher genome assembly and reveals the patterns of avian recombination rate variation and chromosomal evolution

(2014) Takeshi Kawakami et al.   MOLECULAR ECOLOGY

Three crocodilian genomes reveal ancestral patterns of evolution among archosaurs

(2014) R. E. Green et al.   SCIENCE

Comparative genomics reveals insights into avian genome evolution and adaptation

(2014) G. Zhang et al.   SCIENCE

Inference of the Protokaryotypes of Amniotes and Tetrapods and the Evolutionary Processes of Microchromosomes from Comparative Gene Mapping

(2013) Yoshinobu Uno et al.   PLoS One

Sequencing three crocodilian genomes to illuminate the evolution of archosaurs and amniotes

(2013) John A St John et al.   GENOME BIOLOGY

Extensive Homology of Chicken Macrochromosomes in the Karyotypes of Trachemys scripta elegans and Crocodylus niloticus Revealed by Chromosome Painting despite Long Divergence Times

(2012) F. Kasai et al.   CYTOGENETIC AND GENOME RESEARCH

Intrachromosomal rearrangements in avian genome evolution: evidence for regions prone to breakpoints

(2011) B M Skinner et al.   HEREDITY

The genome of the green anole lizard and a comparative analysis with birds and mammals

(2011) Jessica Alföldi et al.   NATURE

Expression of class I histone deacetylases during chick and mouse development

(2010) Christina Murko et al.   INTERNATIONAL JOURNAL OF DEVELOPMENTAL BIOLOGY

The genome of a songbird

(2010) Wesley C. Warren et al.   NATURE

Breakpoint regions and homologous synteny blocks in chromosomes have different evolutionary histories

(2009) D. M. Larkin et al.   GENOME RESEARCH

Palaeogenomics of pterosaurs and the evolution of small genome size in flying vertebrates

(2008) C. L Organ et al.   Biology Letters