Low diversity, activity, and density of transposable elements in five avian genomes

Ancient horizontal transfers of retrotransposons between birds and ancestors of human pathogenic nematodes

(2016) Alexander Suh et al.   Nature Communications

The contribution of transposable elements to size variations between four teleost genomes

(2016) Bo Gao et al.   Mobile DNA

The Wide Distribution and Change of Target Specificity of R2 Non-LTR Retrotransposons in Animals

(2016) Kenji K. Kojima et al.   PLoS One

RNA Exosome-Regulated Long Non-Coding RNA Transcription Controls Super-Enhancer Activity

(2015) Evangelos Pefanis et al.   CELL

Comparative Analysis of Transposable Elements Highlights Mobilome Diversity and Evolution in Vertebrates

(2015) Domitille Chalopin et al.   Genome Biology and Evolution

Genome sequence and genetic diversity of the common carp, Cyprinus carpio

(2014) Peng Xu et al.   NATURE GENETICS

Three crocodilian genomes reveal ancestral patterns of evolution among archosaurs

(2014) R. E. Green et al.   SCIENCE

Comparative genomics reveals insights into avian genome evolution and adaptation

(2014) G. Zhang et al.   SCIENCE

High-coverage sequencing and annotated assemblies of the budgerigar genome

(2014) Ganeshkumar Ganapathy et al.   GigaScience

The zebrafish reference genome sequence and its relationship to the human genome

(2013) Kerstin Howe et al.   NATURE

CR1 retroposons provide a new insight into the phylogeny of Phasianidae species (Aves: Galliformes)

(2012) Zhaofeng Liu et al.   GENE

A Universal Method for the Study of CR1 Retroposons in Nonmodel Bird Genomes

(2012) A. Suh et al.   MOLECULAR BIOLOGY AND EVOLUTION

Retroposon Insertion Patterns of Neoavian Birds: Strong Evidence for an Extensive Incomplete Lineage Sorting Era

(2012) A. Matzke et al.   MOLECULAR BIOLOGY AND EVOLUTION

MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space

(2012) Fredrik Ronquist et al.   SYSTEMATIC BIOLOGY

A major invasion of transposable elements accounts for the large size of the Blumeria graminis f.sp. tritici genome

(2011) Francis Parlange et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

The genome of the green anole lizard and a comparative analysis with birds and mammals

(2011) Jessica Alföldi et al.   NATURE

Transposable Elements in Reptilian and Avian (Sauropsida) Genomes

(2010) D. Kordis   CYTOGENETIC AND GENOME RESEARCH

The genome of a songbird

(2010) Wesley C. Warren et al.   NATURE

The Genome of the Western Clawed Frog Xenopus tropicalis

(2010) U. Hellsten et al.   SCIENCE

Multi-Platform Next-Generation Sequencing of the Domestic Turkey (Meleagris gallopavo): Genome Assembly and Analysis

(2010) Rami A. Dalloul et al.   PLOS BIOLOGY

MGEScan-non-LTR: computational identification and classification of autonomous non-LTR retrotransposons in eukaryotic genomes

(2009) M. Rho et al.   NUCLEIC ACIDS RESEARCH

LTRharvest, an efficient and flexible software for de novo detection of LTR retrotransposons

(2008) David Ellinghaus et al.   BMC BIOINFORMATICS

Identification of novel CR1 subfamilies in an avian order with recently active elements

(2008) J JOHN et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION