4.6 Article

Ultrasound-Based Characterization of Prostate Cancer Using Joint Independent Component Analysis

Journal

IEEE TRANSACTIONS ON BIOMEDICAL ENGINEERING
Volume 62, Issue 7, Pages 1796-1804

Publisher

IEEE-INST ELECTRICAL ELECTRONICS ENGINEERS INC
DOI: 10.1109/TBME.2015.2404300

Keywords

Joint independent component analysis (jICA); prostate cancer (PCa); RF time series

Funding

  1. Natural Sciences and Engineering Research Council of Canada
  2. Canadian Institutes of Health Research (CIHR) [CTP 87515]
  3. Queen's University
  4. Ontario Early Researcher Award

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Objective: This paper presents the results of a new approach for selection of RF time series features based on joint independent component analysis for in vivo characterization of prostate cancer. Methods: We project three sets of RF time series features extracted from the spectrum, fractal dimension, and the wavelet transform of the ultrasound RF data on a space spanned by five joint independent components. Then, we demonstrate that the obtained mixing coefficients from a group of patients can be used to train a classifier, which can be applied to characterize cancerous regions of a test patient. Results: In a leave-one-patient-out cross validation, an area under receiver operating characteristic curve of 0.93 and classification accuracy of 84% are achieved. Conclusion: Ultrasound RF time series can be used to accurately characterize prostate cancer, in vivo without the need for exhaustive search in the feature space. Significance: We use joint independent component analysis for systematic fusion of multiple sets of RF time series features, within a machine learning framework, to characterize PCa in an in vivo study.

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