Monitoring the 5-methoxycarbonylmethyl-2-thiouridine (mcm5s2U) modification in eukaryotic tRNAs via the γ-toxin endonuclease
Published 2018 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Monitoring the 5-methoxycarbonylmethyl-2-thiouridine (mcm5s2U) modification in eukaryotic tRNAs via the γ-toxin endonuclease
Authors
Keywords
-
Journal
RNA
Volume 24, Issue 5, Pages 749-758
Publisher
Cold Spring Harbor Laboratory
Online
2018-02-14
DOI
10.1261/rna.065581.118
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Elp3 and RlmN: A tale of two mitochondrial tail-anchored radical SAM enzymes in Toxoplasma gondii
- (2018) Leah R. Padgett et al. PLoS One
- Detecting RNA modifications in the epitranscriptome: predict and validate
- (2017) Mark Helm et al. NATURE REVIEWS GENETICS
- Combined tRNA modification defects impair protein homeostasis and synthesis of the yeast prion protein Rnq1
- (2017) Raffael Schaffrath et al. Prion
- Celebrating wobble decoding: Half a century and still much is new
- (2017) Paul F. Agris et al. RNA Biology
- Wobble uridine modifications–a reason to live, a reason to die?!
- (2017) Raffael Schaffrath et al. RNA Biology
- Use of a Yeast tRNase Killer Toxin to Diagnose Kti12 Motifs Required for tRNA Modification by Elongator
- (2017) Constance Mehlgarten et al. Toxins
- Loss of ncm5 and mcm5 wobble uridine side chains results in an altered metabolic profile
- (2016) Tony Karlsborn et al. Metabolomics
- Sequence mapping of transfer RNA chemical modifications by liquid chromatography tandem mass spectrometry
- (2016) Robert Ross et al. METHODS
- tRNA anticodon loop modifications ensure protein homeostasis and cell morphogenesis in yeast
- (2016) Roland Klassen et al. NUCLEIC ACIDS RESEARCH
- Enhanced Detection of Post-Transcriptional Modifications Using a Mass-Exclusion List Strategy for RNA Modification Mapping by LC-MS/MS
- (2015) Xiaoyu Cao et al. ANALYTICAL CHEMISTRY
- Insights into molecular plasticity in protein complexes from Trm9-Trm112 tRNA modifying enzyme crystal structure
- (2015) Juliette Létoquart et al. NUCLEIC ACIDS RESEARCH
- The role of wobble uridine modifications in +1 translational frameshifting in eukaryotes
- (2015) Hasan Tükenmez et al. NUCLEIC ACIDS RESEARCH
- Attomole quantification and global profile of RNA modifications: Epitranscriptome of human neural stem cells
- (2015) Maria Basanta-Sanchez et al. NUCLEIC ACIDS RESEARCH
- Rectifier of aberrant mRNA splicing recovers tRNA modification in familial dysautonomia
- (2015) Mayumi Yoshida et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Meta-regulation of Arabidopsis Auxin Responses Depends on tRNA Maturation
- (2015) Johannes Leitner et al. Cell Reports
- Trm9-Catalyzed tRNA Modifications Regulate Global Protein Expression by Codon-Biased Translation
- (2015) Wenjun Deng et al. PLoS Genetics
- Loss of Anticodon Wobble Uridine Modifications Affects tRNALys Function and Protein Levels in Saccharomyces cerevisiae
- (2015) Roland Klassen et al. PLoS One
- Alkbh8 Regulates Selenocysteine-Protein Expression to Protect against Reactive Oxygen Species Damage
- (2015) Lauren Endres et al. PLoS One
- Elongator, a conserved complex required for wobble uridine modifications in Eukaryotes
- (2015) Tony Karlsborn et al. RNA Biology
- Familial dysautonomia (FD) patients have reduced levels of the modified wobble nucleoside mcm5s2U in tRNA
- (2014) Tony Karlsborn et al. BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS
- Quantitative analysis of ribonucleoside modifications in tRNA by HPLC-coupled mass spectrometry
- (2014) Dan Su et al. Nature Protocols
- Protozoan ALKBH8 Oxygenases Display both DNA Repair and tRNA Modification Activities
- (2014) Daria Zdżalik et al. PLoS One
- A human tRNA methyltransferase 9-like protein prevents tumour growth by regulating LIN9 and HIF1-α
- (2013) Ulrike Begley et al. EMBO Molecular Medicine
- tRNA tKUUU, tQUUG, and tEUUC wobble position modifications fine-tune protein translation by promoting ribosome A-site binding
- (2013) V. A. N. Rezgui et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Ikbkap/Elp1 Deficiency Causes Male Infertility by Disrupting Meiotic Progression
- (2013) Fu-Jung Lin et al. PLoS Genetics
- Modification of tRNALysUUU by Elongator Is Essential for Efficient Translation of Stress mRNAs
- (2013) Jorge Fernández-Vázquez et al. PLoS Genetics
- Loss of a Conserved tRNA Anticodon Modification Perturbs Cellular Signaling
- (2013) Boris Zinshteyn et al. PLoS Genetics
- Increased tRNA modification and gene-specific codon usage regulate cell cycle progression during the DNA damage response
- (2012) Ashish Patil et al. CELL CYCLE
- RNA snap ™: a rapid, quantitative and inexpensive, method for isolating total RNA from bacteria
- (2012) Mark B. Stead et al. NUCLEIC ACIDS RESEARCH
- A Genetic Investigation of the KEOPS Complex in Halophilic Archaea
- (2012) Adit Naor et al. PLoS One
- Translational infidelity-induced protein stress results from a deficiency in Trm9-catalyzed tRNA modifications
- (2012) Ashish Patil et al. RNA Biology
- Translational Control of Cell Division by Elongator
- (2012) Fanelie Bauer et al. Cell Reports
- Biosynthesis and function of tRNA modifications in Archaea
- (2011) Gabriela Phillips et al. CURRENT OPINION IN MICROBIOLOGY
- Transfer RNA Methytransferases and Their Corresponding Modifications in Budding Yeast and Humans: Activities, Predications, and Potential Roles in Human Health
- (2011) William L. Towns et al. DNA AND CELL BIOLOGY
- Crystal Structure and RNA Binding Properties of the RNA Recognition Motif (RRM) and AlkB Domains in Human AlkB Homolog 8 (ABH8), an Enzyme Catalyzing tRNA Hypermodification
- (2011) Chiara Pastore et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Roles of Trm9- and ALKBH8-like proteins in the formation of modified wobble uridines in Arabidopsis tRNA
- (2011) Vibeke Leihne et al. NUCLEIC ACIDS RESEARCH
- Mechanism of activation of methyltransferases involved in translation by the Trm112 ‘hub’ protein
- (2011) Dominique Liger et al. NUCLEIC ACIDS RESEARCH
- Unexpected Accumulation of ncm5U and ncm5s2U in a trm9 Mutant Suggests an Additional Step in the Synthesis of mcm5U and mcm5s2U
- (2011) Changchun Chen et al. PLoS One
- ALKBH8-mediated formation of a novel diastereomeric pair of wobble nucleosides in mammalian tRNA
- (2011) Erwin van den Born et al. Nature Communications
- Elongator Complex Influences Telomeric Gene Silencing and DNA Damage Response by Its Role in Wobble Uridine tRNA Modification
- (2011) Changchun Chen et al. PLoS Genetics
- The AlkB Domain of Mammalian ABH8 Catalyzes Hydroxylation of 5-Methoxycarbonylmethyluridine at the Wobble Position of tRNA
- (2010) Ye Fu et al. ANGEWANDTE CHEMIE-INTERNATIONAL EDITION
- Trm112p Is a 15-kDa Zinc Finger Protein Essential for the Activity of Two tRNA and One Protein Methyltransferases in Yeast
- (2010) Marie-Hélène Mazauric et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Mammalian ALKBH8 Possesses tRNA Methyltransferase Activity Required for the Biogenesis of Multiple Wobble Uridine Modifications Implicated in Translational Decoding
- (2010) L. Songe-Moller et al. MOLECULAR AND CELLULAR BIOLOGY
- Human AlkB Homolog ABH8 Is a tRNA Methyltransferase Required for Wobble Uridine Modification and DNA Damage Survival
- (2010) D. Fu et al. MOLECULAR AND CELLULAR BIOLOGY
- Elongator function in tRNA wobble uridine modification is conserved between yeast and plants
- (2010) Constance Mehlgarten et al. MOLECULAR MICROBIOLOGY
- A Quantitative Systems Approach Reveals Dynamic Control of tRNA Modifications during Cellular Stress
- (2010) Clement T. Y. Chan et al. PLoS Genetics
- Deciphering synonymous codons in the three domains of life: Co-evolution with specific tRNA modification enzymes
- (2009) Henri Grosjean et al. FEBS LETTERS
- Elongator function depends on antagonistic regulation by casein kinase Hrr25 and protein phosphatase Sit4
- (2009) Constance Mehlgarten et al. MOLECULAR MICROBIOLOGY
- Ubiquitin-related modifier Urm1 acts as a sulphur carrier in thiolation of eukaryotic transfer RNA
- (2009) Sebastian Leidel et al. NATURE
- Mechanistic characterization of the sulfur-relay system for eukaryotic 2-thiouridine biogenesis at tRNA wobble positions
- (2009) Akiko Noma et al. NUCLEIC ACIDS RESEARCH
- Structure-activity relationships in Kluyveromyces lactis -toxin, a eukaryal tRNA anticodon nuclease
- (2009) N. Keppetipola et al. RNA
- Defects in tRNA Modification Associated with Neurological and Developmental Dysfunctions in Caenorhabditis elegans Elongator Mutants
- (2009) Changchun Chen et al. PLoS Genetics
- RNomics and Modomics in the halophilic archaea Haloferax volcanii: identification of RNA modification genes
- (2008) Henri Grosjean et al. BMC GENOMICS
- EnsemblCompara GeneTrees: Complete, duplication-aware phylogenetic trees in vertebrates
- (2008) A. J. Vilella et al. GENOME RESEARCH
- Eukaryotic Wobble Uridine Modifications Promote a Functionally Redundant Decoding System
- (2008) M. J. O. Johansson et al. MOLECULAR AND CELLULAR BIOLOGY
- RNA Repair: An Antidote to Cytotoxic Eukaryal RNA Damage
- (2008) Jayakrishnan Nandakumar et al. MOLECULAR CELL
- tRNA and protein methylase complexes mediate zymocin toxicity in yeast
- (2008) Patrick Studte et al. MOLECULAR MICROBIOLOGY
- The conserved Wobble uridine tRNA thiolase Ctu1-Ctu2 is required to maintain genome integrity
- (2008) M. Dewez et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
Find the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
SearchAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started