Dicer-like and RNA-dependent RNA polymerase gene family identification and annotation in the cultivated Solanum tuberosum and its wild relative S. commersonii

Introgressiomics: a new approach for using crop wild relatives in breeding for adaptation to climate change

(2017) Jaime Prohens et al.   EUPHYTICA

A walk on the wild side: Oryza species as source for rice abiotic stress tolerance

(2017) Paloma Koprovski Menguer et al.   GENETICS AND MOLECULAR BIOLOGY

Expression analysis of argonaute, Dicer-like, and RNA-dependent RNA polymerase genes in cucumber (Cucumis sativus L.) in response to abiotic stress

(2017) DEFANG GAN et al.   JOURNAL OF GENETICS

Subfunctionalization of duplicate MYB genes in Solanum commersonii generated the cold-induced ScAN2 and the anthocyanin regulator ScAN1

(2017) Vincenzo D'Amelia et al.   PLANT CELL AND ENVIRONMENT

Roles of Dicer-Like Proteins 2 and 4 in Intra- and Intercellular Antiviral Silencing

(2017) Cheng Qin et al.   PLANT PHYSIOLOGY

Cloning, identification, and expression analysis of a Dicer-Like gene family from Solanum lycopersicum

(2016) T. Wang et al.   BIOLOGIA PLANTARUM

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

(2016) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

RNA-dependent RNA polymerase 1 in potato (Solanum tuberosum) and its relationship to other plant RNA-dependent RNA polymerases

(2016) Lydia J. R. Hunter et al.   Scientific Reports

TheSolanum commersoniiGenome Sequence Provides Insights into Adaptation to Stress Conditions and Genome Evolution of Wild Potato Relatives

(2015) Riccardo Aversano et al.   PLANT CELL

Comprehensive Analysis of Dicer-Like, Argonaute, and RNA-dependent RNA Polymerase Gene Families in Grapevine (Vitis Vinifera)

(2014) Hualin Zhao et al.   JOURNAL OF PLANT GROWTH REGULATION

The genome of the stress-tolerant wild tomato species Solanum pennellii

(2014) Anthony Bolger et al.   NATURE GENETICS

Identification, Characterization and Expression Profiling of Dicer-Like, Argonaute and RNA-Dependent RNA Polymerase Gene Families in Foxtail Millet

(2014) Chandra Bhan Yadav et al.   PLANT MOLECULAR BIOLOGY REPORTER

Genetic diversity among potato species as revealed by phenotypic resistances and SSR markers

(2013) D. Carputo et al.   Plant Genetic Resources-Characterization and Utilization

Analysis of biochemical variations and microRNA expression in wild (Ipomoea campanulata) and cultivated (Jacquemontia pentantha) species exposed to in vivo water stress

(2013) Vallabhi Ghorecha et al.   PHYSIOLOGY AND MOLECULAR BIOLOGY OF PLANTS

Identifying miRNAs, targets and functions

(2012) B. Liu et al.   BRIEFINGS IN BIOINFORMATICS

Genome-wide identification of Dicer-like, Argonaute and RNA-dependent RNA polymerase gene families and their expression analyses in response to viral infection and abiotic stresses in Solanum lycopersicum

(2012) Miao Bai et al.   GENE

DICER-like Proteins and Their Role in Plant-herbivore Interactions in Nicotiana attenuata

(2012) Tohir Ahmadovich Bozorov et al.   Journal of Integrative Plant Biology

MicroRNA miR396 and RDR6 synergistically regulate leaf development

(2012) Martin A. Mecchia et al.   MECHANISMS OF DEVELOPMENT

Evolution of Animal and Plant Dicers: Early Parallel Duplications and Recurrent Adaptation of Antiviral RNA Binding in Plants

(2012) Krishanu Mukherjee et al.   MOLECULAR BIOLOGY AND EVOLUTION

The tomato genome sequence provides insights into fleshy fruit evolution

(2012)   NATURE

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Genome-Wide Identification, Classification, and Expression Analysis of Autophagy-Associated Gene Homologues in Rice (Oryza sativa L.)

(2011) K. Xia et al.   DNA RESEARCH

Genome sequence and analysis of the tuber crop potato

(2011) Xun Xu et al.   NATURE

The Pfam protein families database

(2011) M. Punta et al.   NUCLEIC ACIDS RESEARCH

Identification and characterization of Dicer-like, Argonaute and RNA-dependent RNA polymerase gene families in maize

(2011) Yexiong Qian et al.   PLANT CELL REPORTS

Genomic survey, characterization and expression profile analysis of the peptide transporter family in rice (Oryza sativa L.)

(2010) Xiaobo Zhao et al.   BMC PLANT BIOLOGY

Control of female gamete formation by a small RNA pathway in Arabidopsis

(2010) Vianey Olmedo-Monfil et al.   NATURE

Arabidopsis RNA-Dependent RNA Polymerases and Dicer-Like Proteins in Antiviral Defense and Small Interfering RNA Biogenesis during Turnip Mosaic Virus Infection

(2010) H. Garcia-Ruiz et al.   PLANT CELL

ARGONAUTE 1 homeostasis invokes the coordinate action of the microRNA and siRNA pathways

(2009) Allison C Mallory et al.   EMBO REPORTS

A Dual Role for the S-Locus Receptor Kinase in Self-Incompatibility and Pistil Development Revealed by an Arabidopsis rdr6 Mutation

(2009) T. Tantikanjana et al.   PLANT CELL

Genome-wide identification, organization and phylogenetic analysis of Dicer-like, Argonaute and RNA-dependent RNA Polymerase gene families and their expression analysis during reproductive development and stress in rice

(2008) Meenu Kapoor et al.   BMC GENOMICS

Structural and Genetic Requirements for the Biogenesis of Tobacco Rattle Virus-Derived Small Interfering RNAs

(2008) L. Donaire et al.   JOURNAL OF VIROLOGY

Divergent Regulation of Terpenoid Metabolism in the Trichomes of Wild and Cultivated Tomato Species

(2008) K. Besser et al.   PLANT PHYSIOLOGY

Importance of Lineage-Specific Expansion of Plant Tandem Duplicates in the Adaptive Response to Environmental Stimuli

(2008) K. Hanada et al.   PLANT PHYSIOLOGY