Analysis of physiological and miRNA responses to Pi deficiency in alfalfa (Medicago sativa L.)

Genome-wide analysis of miRNAs and Tasi-RNAs in Zea mays in response to phosphate deficiency

(2017) Saurabh Gupta et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

Transcriptomic Analysis of Soil Grown T. aestivum cv. Root to Reveal the Changes in Expression of Genes in Response to Multiple Nutrients Deficiency

(2017) Saurabh Gupta et al.   Frontiers in Plant Science

Identification, Characterization, and Functional Validation of Drought-responsive MicroRNAs in Subtropical Maize Inbreds

(2017) Jayaraman Aravind et al.   Frontiers in Plant Science

Identification of Drought-Responsive MicroRNAs from Roots and Leaves of Alfalfa by High-Throughput Sequencing

(2017) Yue Li et al.   Genes

Comparative transcriptome investigation of global gene expression changes caused by miR156 overexpression in Medicago sativa

(2016) Ruimin Gao et al.   BMC GENOMICS

ABA receptor PYL9 promotes drought resistance and leaf senescence

(2016) Yang Zhao et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genome-Wide Investigation of MicroRNAs and Their Targets in Response to Freezing Stress in Medicago sativa L., Based on High-Throughput Sequencing

(2016) Yongjun Shu et al.   G3-Genes Genomes Genetics

Identification of drought-responsive microRNAs and their targets in Ammopiptanthus mongolicus by using high-throughput sequencing

(2016) Fei Gao et al.   Scientific Reports

Improving crop nutrient efficiency through root architecture modifications

(2015) Xinxin Li et al.   Journal of Integrative Plant Biology

Small RNA and degradome sequencing reveals important microRNA function inAstragalus chrysochlorusresponse to selenium stimuli

(2015) Ozgur Cakir et al.   PLANT BIOTECHNOLOGY JOURNAL

Ectopic expression of LjmiR156 delays flowering, enhances shoot branching, and improves forage quality in alfalfa

(2015) Banyar Aung et al.   Plant Biotechnology Reports

The role of miR156/SPLs modules in Arabidopsis lateral root development

(2015) Niu Yu et al.   PLANT JOURNAL

Role of microRNAs involved in plant response to nitrogen and phosphorous limiting conditions

(2015) Giao N. Nguyen et al.   Frontiers in Plant Science

Transcriptome and metabolome analysis of plant sulfate starvation and resupply provides novel information on transcriptional regulation of metabolism associated with sulfur, nitrogen and phosphorus nutritional responses in Arabidopsis

(2015) Monika Bielecka et al.   Frontiers in Plant Science

Phosphate Nutrition: Improving Low-Phosphate Tolerance in Crops

(2014) Damar Lizbeth López-Arredondo et al.   Annual Review of Plant Biology

A comparison of performance of plant miRNA target prediction tools and the characterization of features for genome-wide target prediction

(2014) Prashant K Srivastava et al.   BMC GENOMICS

RNA-seq transcriptome profiling reveals that Medicago truncatula nodules acclimate N 2 fixation before emerging P deficiency reaches the nodules

(2014) Ricardo A. Cabeza et al.   JOURNAL OF EXPERIMENTAL BOTANY

Regulation of microRNA biogenesis

(2014) Minju Ha et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

A miR169 isoform regulates specific NF-YA targets and root architecture in Arabidopsis

(2014) Céline Sorin et al.   NEW PHYTOLOGIST

Small RNA deep sequencing identifies novel and salt-stress-regulated microRNAs from roots ofMedicago sativaandMedicago truncatula

(2014) Rui-Cai Long et al.   PHYSIOLOGIA PLANTARUM

Identification of primary and secondary metabolites with phosphorus status-dependent abundance inArabidopsis, and of the transcription factor PHR1 as a major regulator of metabolic changes during phosphorus limitation

(2014) BIKRAM-DATT PANT et al.   PLANT CELL AND ENVIRONMENT

Albino midrib 1, encoding a putative potassium efflux antiporter, affects chloroplast development and drought tolerance in rice

(2014) Peike Sheng et al.   PLANT CELL REPORTS

miR444a has multiple functions in the rice nitrate-signaling pathway

(2014) Yongsheng Yan et al.   PLANT JOURNAL

Genome-Wide Identification of Different Dormant Medicago sativa L. MicroRNAs in Response to Fall Dormancy

(2014) Wenna Fan et al.   PLoS One

The role of VuMATE1 expression in aluminium-inducible citrate secretion in rice bean (Vigna umbellata) roots

(2013) Mei Ya Liu et al.   JOURNAL OF EXPERIMENTAL BOTANY

Spatio-Temporal Transcript Profiling of Rice Roots and Shoots in Response to Phosphate Starvation and Recovery

(2013) D. Secco et al.   PLANT CELL

miR396 affects mycorrhization and root meristem activity in the legumeMedicago truncatula

(2013) Jérémie Bazin et al.   PLANT JOURNAL

Genome-Wide Identification and Comparative Analysis of Conserved and Novel MicroRNAs in Grafted Watermelon by High-Throughput Sequencing

(2013) Na Liu et al.   PLoS One

Elucidation of miRNAs-Mediated Responses to Low Nitrogen Stress by Deep Sequencing of Two Soybean Genotypes

(2013) Yejian Wang et al.   PLoS One

miREvo: an integrative microRNA evolutionary analysis platform for next-generation sequencing experiments

(2012) Ming Wen et al.   BMC BIOINFORMATICS

Identification of Glycine Max MicroRNAs in response to phosphorus deficiency

(2012) Aihua Sha et al.   JOURNAL OF PLANT BIOLOGY

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Identification of Nitrogen Starvation-Responsive MicroRNAs in Arabidopsis thaliana

(2012) Gang Liang et al.   PLoS One

Signaling Network in Sensing Phosphate Availability in Plants

(2011) Tzyy-Jen Chiou et al.   Annual Review of Plant Biology

psRNATarget: a plant small RNA target analysis server

(2011) Xinbin Dai et al.   NUCLEIC ACIDS RESEARCH

miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades

(2011) Marc R. Friedländer et al.   NUCLEIC ACIDS RESEARCH

Genome-wide identification of Medicago truncatula microRNAs and their targets reveals their differential regulation by heavy metal

(2011) ZHAO SHENG ZHOU et al.   PLANT CELL AND ENVIRONMENT

Phosphorus Nutrition of Proteaceae in Severely Phosphorus-Impoverished Soils: Are There Lessons To Be Learned for Future Crops?

(2011) H. Lambers et al.   PLANT PHYSIOLOGY

The Role of MicroRNAs in Phosphorus Deficiency Signaling

(2011) H.-F. Kuo et al.   PLANT PHYSIOLOGY

Root Phenes for Enhanced Soil Exploration and Phosphorus Acquisition: Tools for Future Crops

(2011) J. P. Lynch   PLANT PHYSIOLOGY

TAPIR, a web server for the prediction of plant microRNA targets, including target mimics

(2010) Eric Bonnet et al.   BIOINFORMATICS

Analysis of phosphorus-deficient responsive miRNAs and cis-elements from soybean (Glycine max L.)

(2010) Hou Qing Zeng et al.   JOURNAL OF PLANT PHYSIOLOGY

Expression Pattern Suggests a Role of MiR399 in the Regulation of the Cellular Response to Local Pi Increase During Arbuscular Mycorrhizal Symbiosis

(2010) Anja Branscheid et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

MicroRNA expression profile in common bean (Phaseolus vulgaris) under nutrient deficiency stresses and manganese toxicity

(2010) Oswaldo Valdés-López et al.   NEW PHYTOLOGIST

Identification of the 2-Hydroxyglutarate and Isovaleryl-CoA Dehydrogenases as Alternative Electron Donors Linking Lysine Catabolism to the Electron Transport Chain of Arabidopsis Mitochondria

(2010) W. L. Araujo et al.   PLANT CELL

Small RNAs and Their Roles in Plant Development

(2009) Xuemei Chen   Annual Review of Cell and Developmental Biology

Origin, Biogenesis, and Activity of Plant MicroRNAs

(2009) Olivier Voinnet   CELL

Copper Delivery by the Copper Chaperone for Chloroplast and Cytosolic Copper/Zinc-Superoxide Dismutases: Regulation and Unexpected Phenotypes in an Arabidopsis Mutant

(2009) Christopher M. Cohu et al.   Molecular Plant

Cloning and characterization of small RNAs from Medicago truncatula reveals four novel legume-specific microRNA families

(2009) Guru Jagadeeswaran et al.   NEW PHYTOLOGIST

Uncovering Small RNA-Mediated Responses to Phosphate Deficiency in Arabidopsis by Deep Sequencing

(2009) L.-C. Hsieh et al.   PLANT PHYSIOLOGY

Improving phosphorus acquisition of white clover (Trifolium repens L.) by transgenic expression of plant-derived phytase and acid phosphatase genes

(2009) Xue-Feng Ma et al.   PLANT SCIENCE

microRNA expression profiles associated with phosphorus deficiency in white lupin (Lupinus albus L.)

(2009) Yi Yong Zhu et al.   PLANT SCIENCE

Closely Related Members of theMedicago truncatulaPHT1 Phosphate Transporter Gene Family Encode Phosphate Transporters with Distinct Biochemical Activities

(2008) Jinyuan Liu et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Criteria for Annotation of Plant MicroRNAs

(2008) B. C. Meyers et al.   PLANT CELL

MicroRNA166 controls root and nodule development in Medicago truncatula

(2008) Adnane Boualem et al.   PLANT JOURNAL

MicroRNA399 is a long-distance signal for the regulation of plant phosphate homeostasis

(2008) Bikram Datt Pant et al.   PLANT JOURNAL

Hormone interactions during lateral root formation

(2008) Hidehiro Fukaki et al.   PLANT MOLECULAR BIOLOGY

A Second Mechanism for Aluminum Resistance in Wheat Relies on the Constitutive Efflux of Citrate from Roots

(2008) P. R. Ryan et al.   PLANT PHYSIOLOGY