Comprehensive transcriptome analyses correlated with untargeted metabolome reveal differentially expressed pathways in response to cell wall alterations

DGE-seq analysis of MUR3 -related Arabidopsis mutants provides insight into how dysfunctional xyloglucan affects cell elongation

(2017) Zongchang Xu et al.   PLANT SCIENCE

Transgenic expression of fungal accessory hemicellulases in Arabidopsis thaliana triggers transcriptional patterns related to biotic stress and defense response

(2017) Alex Yi-Lin Tsai et al.   PLoS One

Combined transcriptome and metabolome analyses to understand the dynamic responses of rice plants to attack by the rice stem borer Chilo suppressalis (Lepidoptera: Crambidae)

(2016) Qingsong Liu et al.   BMC PLANT BIOLOGY

Cell wall integrity signaling in plants: “To grow or not to grow that's the question”

(2016) Aline Voxeur et al.   GLYCOBIOLOGY

GRP-3andKAPP,encoding interactors of WAK1, negatively affect defense responses induced by oligogalacturonides and local response to wounding

(2016) Giovanna Gramegna et al.   JOURNAL OF EXPERIMENTAL BOTANY

Rapid Oligo-Galacturonide Induced Changes in Protein Phosphorylation in Arabidopsis

(2016) Bruce D. Kohorn et al.   MOLECULAR & CELLULAR PROTEOMICS

Decreased Polysaccharide Feruloylation Compromises Plant Cell Wall Integrity and Increases Susceptibility to Necrotrophic Fungal Pathogens

(2016) Nathan T. Reem et al.   Frontiers in Plant Science

Cell wall-associated kinases and pectin perception

(2015) Bruce D. Kohorn   JOURNAL OF EXPERIMENTAL BOTANY

Discovery of a novel amino acid racemase through exploration of natural variation inArabidopsis thaliana

(2015) Renee C. Strauch et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

QQSorphan gene regulates carbon and nitrogen partitioning across species via NF-YC interactions

(2015) Ling Li et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Acetylation of cell wall is required for structural integrity of the leaf surface and exerts a global impact on plant stress responses

(2015) Majse Nafisi et al.   Frontiers in Plant Science

An update on receptor-like kinase involvement in the maintenance of plant cell wall integrity

(2014) Timo Engelsdorf et al.   ANNALS OF BOTANY

Plant Cell Wall–Degrading Enzymes and Their Secretion in Plant-Pathogenic Fungi

(2014) Christian P. Kubicek et al.   Annual Review of Phytopathology

Requirement for Pectin Methyl Esterase and Preference for Fragmented over Native Pectins for Wall-associated Kinase-activated, EDS1/PAD4-dependent Stress Response in Arabidopsis

(2014) Bruce D. Kohorn et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Transcriptomic profiling revealed an important role of cell wall remodeling and ethylene signaling pathway during salt acclimation in Arabidopsis

(2014) Xiaoyan Shen et al.   PLANT MOLECULAR BIOLOGY

Microbial signature-triggered plant defense responses and early signaling mechanisms

(2014) Shujing Wu et al.   PLANT SCIENCE

Plant cell wall dynamics and wall-related susceptibility in plant–pathogen interactions

(2014) Daniela Bellincampi et al.   Frontiers in Plant Science

Wounding in the plant tissue: the defense of a dangerous passage

(2014) Daniel V. Savatin et al.   Frontiers in Plant Science

Fatty acids and early detection of pathogens

(2013) Justin W Walley et al.   CURRENT OPINION IN PLANT BIOLOGY

Transgenic expression of pectin methylesterase inhibitors limits tobamovirus spread in tobacco and Arabidopsis

(2013) Vincenzo Lionetti et al.   MOLECULAR PLANT PATHOLOGY

A global approach to analysis and interpretation of metabolic data for plant natural product discovery

(2013) Manhoi Hur et al.   NATURAL PRODUCT REPORTS

RNAseq-based transcriptome analysis ofLactuca sativainfected by the fungal necrotrophBotrytis cinerea

(2013) KAAT DE CREMER et al.   PLANT CELL AND ENVIRONMENT

Arabidopsis and Brachypodium distachyon Transgenic Plants Expressing Aspergillus nidulans Acetylesterases Have Decreased Degree of Polysaccharide Acetylation and Increased Resistance to Pathogens

(2013) G. Pogorelko et al.   PLANT PHYSIOLOGY

Transcriptome Responses to Combinations of Stresses in Arabidopsis

(2013) S. Rasmussen et al.   PLANT PHYSIOLOGY

Oligogalacturonides: plant damage-associated molecular patterns and regulators of growth and development

(2013) Simone Ferrari   Frontiers in Plant Science

Growth Control and Cell Wall Signaling in Plants

(2012) Sebastian Wolf et al.   Annual Review of Plant Biology

Linking ligand perception by PEPR pattern recognition receptors to cytosolic Ca2+ elevation and downstream immune signaling in plants

(2012) Y. Ma et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Tomato immune receptor Ve1 recognizes effector of multiple fungal pathogens uncovered by genome and RNA sequencing

(2012) R. de Jonge et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Detecting Differential Expression in RNA-sequence Data Using Quasi-likelihood with Shrunken Dispersion Estimates

(2012) Steven P. Lund et al.   Statistical Applications in Genetics and Molecular Biology

The Plant Cell Wall: A Dynamic Barrier Against Pathogen Invasion

(2012) William Underwood   Frontiers in Plant Science

Plant cell wall integrity maintenance as an essential component of biotic stress response mechanisms

(2012) Thorsten Hamann   Frontiers in Plant Science

Engineering plant resistance by constructing chimeric receptors that recognize damage-associated molecular patterns (DAMPs)

(2011) Giulia De Lorenzo et al.   FEBS LETTERS

Post-synthetic modification of plant cell walls by expression of microbial hydrolases in the apoplast

(2011) Gennady Pogorelko et al.   PLANT MOLECULAR BIOLOGY

Role of the Extensin Superfamily in Primary Cell Wall Architecture

(2011) D. T. A. Lamport et al.   PLANT PHYSIOLOGY

Monitoring the Outside: Cell Wall-Sensing Mechanisms

(2010) C. Ringli   PLANT PHYSIOLOGY

A domain swap approach reveals a role of the plant wall-associated kinase 1 (WAK1) as a receptor of oligogalacturonides

(2010) A. Brutus et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Together we are strong-cell wall integrity sensors in yeasts

(2010) Rosaura Rodicio et al.   YEAST

TopHat: discovering splice junctions with RNA-Seq

(2009) Cole Trapnell et al.   BIOINFORMATICS

Chitinase Gene Expression in Response to Environmental Stresses inArabidopsis thaliana: Chitinase Inhibitor Allosamidin Enhances Stress Tolerance

(2009) Yasuhiro TAKENAKA et al.   BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY

Tryptophan-Derived Metabolites Are Required for Antifungal Defense in the Arabidopsis mlo2 Mutant

(2009) C. Consonni et al.   PLANT PHYSIOLOGY

Identification of an Arabidopsis Feruloyl-Coenzyme A Transferase Required for Suberin Synthesis

(2009) I. Molina et al.   PLANT PHYSIOLOGY

A hydroxycinnamoyltransferase responsible for synthesizing suberin aromatics in Arabidopsis

(2009) J.-Y. Gou et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Three related receptor-like kinases are required for optimal cell elongation in Arabidopsis thaliana

(2009) H. Guo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Innate Immunity in Plants: An Arms Race Between Pattern Recognition Receptors in Plants and Effectors in Microbial Pathogens

(2009) T. Boller et al.   SCIENCE

Comparative transcriptome analysis of Arabidopsis thaliana infested by diamond back moth (Plutella xylostella) larvae reveals signatures of stress response, secondary metabolism, and signaling

(2008) Juergen Ehlting et al.   BMC GENOMICS

Analyzing real-time PCR data by the comparative CT method

(2008) Thomas D Schmittgen et al.   Nature Protocols

Arabidopsis WRKY38 and WRKY62 Transcription Factors Interact with Histone Deacetylase 19 in Basal Defense

(2008) K.-C. Kim et al.   PLANT CELL

Identification of cell-wall stress as a hexose-dependent and osmosensitive regulator of plant responses

(2008) Thorsten Hamann et al.   PLANT JOURNAL

The AP2/ERF Domain Transcription Factor ORA59 Integrates Jasmonic Acid and Ethylene Signals in Plant Defense

(2008) M. Pre et al.   PLANT PHYSIOLOGY

BSKs Mediate Signal Transduction from the Receptor Kinase BRI1 in Arabidopsis

(2008) W. Tang et al.   SCIENCE