Azacitidine (5-AzaC)-treatment and mutations in DNA methylase genes affect embryogenic response and expression of the genes that are involved in somatic embryogenesis in Arabidopsis

Expression profiling of AUXIN RESPONSE FACTOR genes during somatic embryogenesis induction in Arabidopsis

(2017) Barbara Wójcikowska et al.   PLANT CELL REPORTS

Spatial and temporal expression of cytosine-5 DNA methyltransferase and DNA demethylase gene families of the Ricinus communis during seed development and drought stress

(2017) Drosou Victoria et al.   PLANT GROWTH REGULATION

The BABY BOOM transcription factor activates the LEC1-ABI3-FUS3-LEC2 network to induce somatic embryogenesis

(2017) Anneke Horstman et al.   PLANT PHYSIOLOGY

PRC2 Represses Hormone-Induced Somatic Embryogenesis in Vegetative Tissue of Arabidopsis thaliana

(2017) Iva Mozgová et al.   PLoS Genetics

DNA-Demethylase Regulated Genes Show Methylation-Independent Spatiotemporal Expression Patterns

(2017) Ulrike Schumann et al.   Frontiers in Plant Science

miR160 and miR166/165 Contribute to the LEC2-Mediated Auxin Response Involved in the Somatic Embryogenesis Induction in Arabidopsis

(2017) Anna M. Wójcik et al.   Frontiers in Plant Science

MicroRNAs Are Intensively Regulated during Induction of Somatic Embryogenesis in Arabidopsis

(2017) Katarzyna Szyrajew et al.   Frontiers in Plant Science

Transcriptional Responses to the Auxin Hormone

(2016) Dolf Weijers et al.   Annual Review of Plant Biology

Plant DNA methyltransferase genes: Multiplicity, expression, methylation patterns

(2016) V. V. Ashapkin et al.   BIOCHEMISTRY-MOSCOW

miR393 contributes to the embryogenic transition induced in vitro in Arabidopsis via the modification of the tissue sensitivity to auxin treatment

(2016) Anna M. Wójcik et al.   PLANTA

Global scale transcriptome analysis of Arabidopsis embryogenesis in vitro

(2015) Anushka M Wickramasuriya et al.   BMC GENOMICS

DNA methylation pathways and their crosstalk with histone methylation

(2015) Jiamu Du et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

DRM1 and DRM2 are involved in Arabidopsis callus formation

(2015) Fangwei Jiang et al.   PLANT CELL TISSUE AND ORGAN CULTURE

Competency for shoot regeneration from Arabidopsis root explants is regulated by DNA methylation

(2015) Or Shemer et al.   PLANT SCIENCE

Regulatory link between DNA methylation and active demethylation inArabidopsis

(2015) Mingguang Lei et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Methylation-Sensitive Expression of a DNA Demethylase Gene Serves As an Epigenetic Rheostat

(2015) Ben P. Williams et al.   PLoS Genetics

5-azacytidine promotes microspore embryogenesis initiation by decreasing global DNA methylation, but prevents subsequent embryo development in rapeseed and barley

(2015) María-Teresa Solís et al.   Frontiers in Plant Science

The role of chromatin modifications in somatic embryogenesis in plants

(2015) Clelia De-la-Peña et al.   Frontiers in Plant Science

Early markers are present in both embryogenesis pathways from microspores and immature zygotic embryos in cork oak, Quercus suberL

(2014) Héctor Rodríguez-Sanz et al.   BMC PLANT BIOLOGY

VIM proteins regulate transcription exclusively through the MET1 cytosine methylation pathway

(2014) Molly S Shook et al.   Epigenetics

Characteristics of cytosine methylation status and methyltransferase genes in the early development stage of cauliflower (Brassica oleracea L. var. botrytis)

(2014) Hui Li et al.   PLANT CELL TISSUE AND ORGAN CULTURE

Evaluation of DNA methylation using methylation-sensitive amplification polymorphism in plant tissues grown in vivo and in vitro

(2014) Mangal S. Rathore et al.   PLANT GROWTH REGULATION

Overproduction of stomatal lineage cells in Arabidopsis mutants defective in active DNA demethylation

(2014) Chizuko Yamamuro et al.   Nature Communications

The Arabidopsis Nucleosome Remodeler DDM1 Allows DNA Methyltransferases to Access H1-Containing Heterochromatin

(2013) Assaf Zemach et al.   CELL

Comprehensive Analysis of Silencing Mutants Reveals Complex Regulation of the Arabidopsis Methylome

(2013) Hume Stroud et al.   CELL

Epigenetic differences between shoots and roots inArabidopsisreveals tissue-specific regulation

(2013) Nicolas Widman et al.   Epigenetics

NATURAL VARIATION IN EPIGENETIC GENE REGULATION AND ITS EFFECTS ON PLANT DEVELOPMENTAL TRAITS

(2013) Franziska Turck et al.   EVOLUTION

Molecular regulation of plant somatic embryogenesis

(2013) Mohamed Elhiti et al.   IN VITRO CELLULAR & DEVELOPMENTAL BIOLOGY-PLANT

Non-CG methylation patterns shape the epigenetic landscape in Arabidopsis

(2013) Hume Stroud et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

In search of markers for somatic embryo maturation in hybrid larch (Larix×eurolepis): global DNA methylation and proteomic analyses

(2013) Caroline Teyssier et al.   PHYSIOLOGIA PLANTARUM

LEAFY COTYLEDON2 (LEC2) promotes embryogenic induction in somatic tissues of Arabidopsis, via YUCCA-mediated auxin biosynthesis

(2013) Barbara Wójcikowska et al.   PLANTA

Extensive Modulation of the Transcription Factor Transcriptome during Somatic Embryogenesis in Arabidopsis thaliana

(2013) Marta Gliwicka et al.   PLoS One

Induced Expression of AtLEC1 and AtLEC2 Differentially Promotes Somatic Embryogenesis in Transgenic Tobacco Plants

(2013) Fengdan Guo et al.   PLoS One

New Insights into Somatic Embryogenesis: LEAFY COTYLEDON1, BABY BOOM1 and WUSCHEL-RELATED HOMEOBOX4 Are Epigenetically Regulated in Coffea canephora

(2013) Geovanny I. Nic-Can et al.   PLoS One

DDM1 and ROS1 have a role in UV-B induced- and oxidative DNA damage in A. thaliana

(2013) Julia I. Qüesta et al.   Frontiers in Plant Science

DNA Methylation Dynamics during Sexual Reproduction in Arabidopsis thaliana

(2012) Pauline E. Jullien et al.   CURRENT BIOLOGY

Functions of DNA methylation: islands, start sites, gene bodies and beyond

(2012) Peter A. Jones   NATURE REVIEWS GENETICS

5-Azacytidine combined with 2,4-D improves somatic embryogenesis of Acca sellowiana (O. Berg) Burret by means of changes in global DNA methylation levels

(2012) Hugo P. F. Fraga et al.   PLANT CELL REPORTS

Variations in genomic DNA methylation during the long-term in vitro proliferation of oil palm embryogenic suspension cultures

(2012) Alain Rival et al.   PLANT CELL REPORTS

Variations in leaf morphology and DNA methylation following in vitro culture of Malus xiaojinensis

(2012) Huang Huang et al.   PLANT CELL TISSUE AND ORGAN CULTURE

The Epigenome and Plant Development

(2011) Guangming He et al.   Annual Review of Plant Biology

Regulation and function of DNA methylation in plants and animals

(2011) Xin-Jian He et al.   CELL RESEARCH

Genome demethylation and imprinting in the endosperm

(2011) Matthew J Bauer et al.   CURRENT OPINION IN PLANT BIOLOGY

An epigenetic view of plant cells cultured in vitro: somaclonal variation and beyond

(2011) C. Miguel et al.   JOURNAL OF EXPERIMENTAL BOTANY

Efficient sweet pepper transformation mediated by the BABY BOOM transcription factor

(2011) Iris Heidmann et al.   PLANT CELL REPORTS

Influence of 5′-azacitidine on promoting recovery of cell competence for shoot organogenesis in Arabidopsis

(2011) Yoshihiko Tokuji et al.   PLANT CELL TISSUE AND ORGAN CULTURE

Genome-Wide Analysis Reveals Gene Expression and Metabolic Network Dynamics during Embryo Development in Arabidopsis

(2011) D. Xiang et al.   PLANT PHYSIOLOGY

DNA Methylation and Histone Modifications Regulate De Novo Shoot Regeneration in Arabidopsis by Modulating WUSCHEL Expression and Auxin Signaling

(2011) Wei Li et al.   PLoS Genetics

Repeat elements and the Arabidopsis DNA methylation landscape

(2010) F K Teixeira et al.   HEREDITY

DNA cytosine methylation in plant development

(2010) Meishan Zhang et al.   Journal of Genetics and Genomics

Establishing, maintaining and modifying DNA methylation patterns in plants and animals

(2010) Julie A. Law et al.   NATURE REVIEWS GENETICS

VisuaLRTC: A New View on Lateral Root Initiation by Combining Specific Transcriptome Data Sets

(2010) B. Parizot et al.   PLANT PHYSIOLOGY

Targeting DNA Methylation

(2009) J.-P. J. Issa et al.   CLINICAL CANCER RESEARCH

LEAFY COTYLEDON2 gene expression and auxin treatment in relation to embryogenic capacity of Arabidopsis somatic cells

(2009) Agnieszka Ledwoń et al.   PLANT CELL REPORTS

Purification and characterization of rice DNA methyltransferase

(2009) Prapapan Teerawanichpan et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Genome-Wide Demethylation of Arabidopsis Endosperm

(2009) T.-F. Hsieh et al.   SCIENCE

DNA demethylation and decrease on free polyamines is associated with the embryogenic capacity of Pinus nigra Arn. cell culture

(2009) Carlos Noceda et al.   TREES-STRUCTURE AND FUNCTION

Epigenetics, DNA Methylation, and Chromatin Modifying Drugs

(2008) Moshe Szyf   Annual Review of Pharmacology and Toxicology

The rules of gene expression in plants: Organ identity and gene body methylation are key factors for regulation of gene expression in Arabidopsis thaliana

(2008) Felipe F Aceituno et al.   BMC GENOMICS

Tandem repeats upstream of the Arabidopsis endogene SDC recruit non-CG DNA methylation and initiate siRNA spreading

(2008) I. R. Henderson et al.   GENES & DEVELOPMENT

Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning

(2008) Shawn J. Cokus et al.   NATURE

Promoter DNA Hypermethylation and Gene Repression in Undifferentiated Arabidopsis Cells

(2008) María Berdasco et al.   PLoS One

LECs go crazy in embryo development

(2008) S BRAYBROOK et al.   TRENDS IN PLANT SCIENCE