Coordination of the biliverdin D-ring in bacteriophytochromes

On the (un)coupling of the chromophore, tongue interactions, and overall conformation in a bacterial phytochrome

(2018) Heikki Takala et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Long-range allosteric signaling in red light–regulated diguanylyl cyclases

(2017) Geoffrey Gourinchas et al.   Science Advances

The Crystal Structures of the N-terminal Photosensory Core Module ofAgrobacteriumPhytochrome Agp1 as Parallel and Anti-parallel Dimers

(2016) Soshichiro Nagano et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Structure of the Full-Length Bacteriophytochrome from the Plant Pathogen Xanthomonas campestris Provides Clues to its Long-Range Signaling Mechanism

(2016) Lisandro Horacio Otero et al.   JOURNAL OF MOLECULAR BIOLOGY

Protonation-Dependent Structural Heterogeneity in the Chromophore Binding Site of Cyanobacterial Phytochrome Cph1

(2016) Francisco Velazquez Escobar et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Phytochrome B integrates light and temperature signals in Arabidopsis

(2016) Martina Legris et al.   SCIENCE

Crystal Structure of Deinococcus Phytochrome in the Photoactivated State Reveals a Cascade of Structural Rearrangements during Photoconversion

(2016) E. Sethe Burgie et al.   STRUCTURE

Mapping light-driven conformational changes within the photosensory module of plant phytochrome B

(2016) Silke von Horsten et al.   Scientific Reports

Structural photoactivation of a full-length bacterial phytochrome

(2016) A. Bjo rling et al.   Science Advances

The room temperature crystal structure of a bacterial phytochrome determined by serial femtosecond crystallography

(2016) Petra Edlund et al.   Scientific Reports

Ubiquitous Structural Signaling in Bacterial Phytochromes

(2015) Alexander Björling et al.   Journal of Physical Chemistry Letters

A protonation-coupled feedback mechanism controls the signalling process in bathy phytochromes

(2015) Francisco Velazquez Escobar et al.   Nature Chemistry

Light Signaling Mechanism of Two Tandem Bacteriophytochromes

(2015) Xiaojing Yang et al.   STRUCTURE

Glotaran: AJava-Based Graphical User Interface for theRPackageTIMP

(2015) Joris J. Snellenburg et al.   Journal of Statistical Software

Connection between Absorption Properties and Conformational Changes in Deinococcus radiodurans Phytochrome

(2014) Heikki Takala et al.   BIOCHEMISTRY

Origins of Fluorescence in Evolved Bacteriophytochromes

(2014) Shyamosree Bhattacharya et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Crystallographic and Electron Microscopic Analyses of a Bacterial Phytochrome Reveal Local and Global Rearrangements during Photoconversion

(2014) E. Sethe Burgie et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Ultrafast Electronic Relaxation and Vibrational Cooling Dynamics of Au144(SC2H4Ph)60 Nanocluster Probed by Transient Mid-IR Spectroscopy

(2014) Satu Mustalahti et al.   Journal of Physical Chemistry C

FTIR Spectroscopy Revealing Light-Dependent Refolding of the Conserved Tongue Region of Bacteriophytochrome

(2014) Emina A. Stojković et al.   Journal of Physical Chemistry Letters

Femto- to Microsecond Photodynamics of an Unusual Bacteriophytochrome

(2014) Tilo Mathes et al.   Journal of Physical Chemistry Letters

Signal amplification and transduction in phytochrome photosensors

(2014) Heikki Takala et al.   NATURE

Eukaryotic algal phytochromes span the visible spectrum

(2014) N. C. Rockwell et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Electronic transitions and heterogeneity of the bacteriophytochrome Pr absorption band: An angle balanced polarization resolved femtosecond VIS pump–IR probe study

(2013) Martin Linke et al.   BIOPHYSICAL JOURNAL

Dynamic Structural Changes Underpin Photoconversion of a Blue/Green Cyanobacteriochrome between Its Dark and Photoactivated States

(2013) Claudia C. Cornilescu et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Fluorescence Properties of the Chromophore-Binding Domain of Bacteriophytochrome from Deinococcus radiodurans

(2013) Heli Lehtivuori et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Unraveling the Primary Isomerization Dynamics in Cyanobacterial Phytochrome Cph1 with Multipulse Manipulations

(2013) Peter W. Kim et al.   Journal of Physical Chemistry Letters

Green/red cyanobacteriochromes regulate complementary chromatic acclimation via a protochromic photocycle

(2013) Y. Hirose et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Far-red light photoactivatable near-infrared fluorescent proteins engineered from a bacterial phytochrome

(2013) Kiryl D. Piatkevich et al.   Nature Communications

Real-Time Tracking of Phytochrome’s Orientational Changes During Pr Photoisomerization

(2012) Yang Yang et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Solid-State NMR Spectroscopy to Probe Photoactivation in Canonical Phytochromes

(2012) Chen Song et al.   PHOTOCHEMISTRY AND PHOTOBIOLOGY

Structures of cyanobacteriochromes from phototaxis regulators AnPixJ and TePixJ reveal general and specific photoconversion mechanism

(2012) R. Narikawa et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Structure of a Bacteriophytochrome and Light-Stimulated Protomer Swapping with a Gene Repressor

(2012) Dom Bellini et al.   STRUCTURE

REFMAC5 for the refinement of macromolecular crystal structures

(2011) Garib N. Murshudov et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

Bacterial phytochromes: More than meets the light

(2011) Michele E. Auldridge et al.   CRITICAL REVIEWS IN BIOCHEMISTRY AND MOLECULAR BIOLOGY

Spectroscopy and a High-Resolution Crystal Structure of Tyr263 Mutants of Cyanobacterial Phytochrome Cph1

(2011) Jo Mailliet et al.   JOURNAL OF MOLECULAR BIOLOGY

Temperature-scan cryocrystallography reveals reaction intermediates in bacteriophytochrome

(2011) Xiaojing Yang et al.   NATURE

Two ground state isoforms and a chromophore D-ring photoflip triggering extensive intramolecular changes in a canonical phytochrome

(2011) C. Song et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Features and development ofCoot

(2010) P. Emsley et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

Light-Induced Activation of Bacterial Phytochrome Agp1 Monitored by Static and Time-Resolved FTIR Spectroscopy

(2010) Patrick Piwowarski et al.   CHEMPHYSCHEM

Primary Reactions of Bacteriophytochrome Observed with Ultrafast Mid-Infrared Spectroscopy

(2010) K. C. Toh et al.   JOURNAL OF PHYSICAL CHEMISTRY A

Phytochrome as Molecular Machine: Revealing Chromophore Action during the Pfr → Pr Photoconversion by Magic-Angle Spinning NMR Spectroscopy

(2010) Thierry Rohmer et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Quaternary organization of a phytochrome dimer as revealed by cryoelectron microscopy

(2010) H. Li et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Proton-transfer and hydrogen-bond interactions determine fluorescence quantum yield and photochemical efficiency of bacteriophytochrome

(2010) K. C. Toh et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Phytochrome functions in Arabidopsis development

(2009) K. A. Franklin et al.   JOURNAL OF EXPERIMENTAL BOTANY

Ultrafast excited-state isomerization in phytochrome revealed by femtosecond stimulated Raman spectroscopy

(2009) Jyotishman Dasgupta et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Mammalian Expression of Infrared Fluorescent Proteins Engineered from a Bacterial Phytochrome

(2009) X. Shu et al.   SCIENCE

Decoding of Light Signals by Plant Phytochromes and Their Interacting Proteins

(2008) Gabyong Bae et al.   Annual Review of Plant Biology

Mutational Analysis ofDeinococcus radioduransBacteriophytochrome Reveals Key Amino Acids Necessary for the Photochromicity and Proton Exchange Cycle of Phytochromes

(2008) Jeremiah R. Wagner et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

The Photoreactions of Recombinant Phytochrome CphA from the CyanobacteriumCalothrixPCC7601: A Low-Temperature UV-Vis and FTIR Study

(2008) Pascale Schwinté et al.   PHOTOCHEMISTRY AND PHOTOBIOLOGY

The structure of a complete phytochrome sensory module in the Pr ground state

(2008) L.-O. Essen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Crystal structure of Pseudomonas aeruginosa bacteriophytochrome: Photoconversion and signal transduction

(2008) X. Yang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA