A Rapid-Assessment Method to Estimate the Distribution of Juvenile Chinook Salmon in Tributary Habitats Using eDNA and Occupancy Estimation

The role of density-dependent and –independent processes in spawning habitat selection by salmon in an Arctic riverscape

(2017) Brock M. Huntsman et al.   PLoS One

Wildfire may increase habitat quality for spring Chinook salmon in the Wenatchee River subbasin, WA, USA

(2016) Rebecca L. Flitcroft et al.   FOREST ECOLOGY AND MANAGEMENT

Using occupancy modelling to compare environmental DNA to traditional field methods for regional-scale monitoring of an endangered aquatic species

(2016) Molly C. Schmelzle et al.   Molecular Ecology Resources

Characterizing the distribution of an endangered salmonid using environmental DNA analysis

(2015) Matthew B. Laramie et al.   BIOLOGICAL CONSERVATION

Moving environmental DNA methods from concept to practice for monitoring aquatic macroorganisms

(2015) Caren S. Goldberg et al.   BIOLOGICAL CONSERVATION

Environmental DNA – An emerging tool in conservation for monitoring past and present biodiversity

(2015) Philip Francis Thomsen et al.   BIOLOGICAL CONSERVATION

Low productivity of Chinook salmon strongly correlates with high summer stream discharge in two Alaskan rivers in the Yukon drainage

(2015) Jason R. Neuswanger et al.   CANADIAN JOURNAL OF FISHERIES AND AQUATIC SCIENCES

Historical trends and extremes in boreal Alaska river basins

(2015) K.E. Bennett et al.   JOURNAL OF HYDROLOGY

unmarked: AnRPackage for Fitting Hierarchical Models of Wildlife Occurrence and Abundance

(2015) Ian Fiske et al.   Journal of Statistical Software

Mechanisms of drift-feeding behavior in juvenile Chinook salmon and the role of inedible debris in a clear-water Alaskan stream

(2014) Jason Neuswanger et al.   ENVIRONMENTAL BIOLOGY OF FISHES

The room temperature preservation of filtered environmental DNA samples and assimilation into a phenol-chloroform-isoamyl alcohol DNA extraction

(2014) Mark A. Renshaw et al.   Molecular Ecology Resources

Identifying Suitable Habitat for Chinook Salmon across a Large, Glaciated Watershed

(2014) Allison L. Bidlack et al.   TRANSACTIONS OF THE AMERICAN FISHERIES SOCIETY

Environmental DNA for wildlife biology and biodiversity monitoring

(2014) Kristine Bohmann et al.   TRENDS IN ECOLOGY & EVOLUTION

Estimating occupancy and abundance of stream amphibians using environmental DNA from filtered water samples

(2013) David S. Pilliod et al.   CANADIAN JOURNAL OF FISHERIES AND AQUATIC SCIENCES

Do stream fish track climate change? Assessing distribution shifts in recent decades

(2013) Lise Comte et al.   ECOGRAPHY

Combining species-specific COI primers with environmental DNA analysis for targeted detection of rare freshwater species

(2013) Jennifer E. Bronnenhuber et al.   Conservation Genetics Resources

Site occupancy models in the analysis of environmental DNA presence/absence surveys: a case study of an emerging amphibian pathogen

(2013) Benedikt R. Schmidt et al.   Methods in Ecology and Evolution

Biomonitoring 2.0: a new paradigm in ecosystem assessment made possible by next-generation DNA sequencing

(2012) DONALD J. BAIRD et al.   MOLECULAR ECOLOGY

Designing studies to detect differences in species occupancy: power analysis under imperfect detection

(2012) Gurutzeta Guillera-Arroita et al.   Methods in Ecology and Evolution

Surveillance of fish species composition using environmental DNA

(2011) Toshifumi Minamoto et al.   LIMNOLOGY

LANDSCAPE-LEVEL MODEL TO PREDICT SPAWNING HABITAT FOR LOWER COLUMBIA RIVER FALL CHINOOK SALMON (ONCORHYNCHUS TSHAWYTSCHA)

(2011) D. Shallin Busch et al.   RIVER RESEARCH AND APPLICATIONS

Beyond Predictions: Biodiversity Conservation in a Changing Climate

(2011) T. P. Dawson et al.   SCIENCE

“Sight-unseen” detection of rare aquatic species using environmental DNA

(2011) Christopher L. Jerde et al.   Conservation Letters

Spawning phenology and habitat use in a Great Plains, USA, stream fish assemblage: an occupancy estimation approach

(2010) Jeffrey A. Falke et al.   CANADIAN JOURNAL OF FISHERIES AND AQUATIC SCIENCES

Species detection using environmental DNA from water samples

(2008) G. F. Ficetola et al.   Biology Letters

Modeling Streams and Hydrogeomorphic Attributes in Oregon From Digital and Field Data1

(2008) Sharon E. Clarke et al.   JOURNAL OF THE AMERICAN WATER RESOURCES ASSOCIATION