The Chloroplast Genome of Lilium henrici: Genome Structure and Comparative Analysis

Plastid phylogenomic analysis of green plants: A billion years of evolutionary history

(2018) Matthew A. Gitzendanner et al.   AMERICAN JOURNAL OF BOTANY

Chloroplast genome analyses and genomic resource development for epilithic sister genera Oresitrophe and Mukdenia (Saxifragaceae), using genome skimming data

(2018) Luxian Liu et al.   BMC GENOMICS

Chloroplast genomic resources for phylogeny and DNA barcoding: a case study on Fritillaria

(2018) Yu Bi et al.   Scientific Reports

Chloroplast genomes of Byrsonima species (Malpighiaceae): comparative analysis and screening of high divergence sequences

(2018) Alison P. A. Menezes et al.   Scientific Reports

Plastid Genome Comparative and Phylogenetic Analyses of the Key Genera in Fagaceae: Highlighting the Effect of Codon Composition Bias in Phylogenetic Inference

(2018) Yanci Yang et al.   Frontiers in Plant Science

The complete chloroplast genome of Nomocharis pardanthina

(2018) Hai-Ying Liu et al.   Mitochondrial DNA Part B-Resources

The Complete Chloroplast Genome Sequences of Fritillaria ussuriensis Maxim. and Fritillaria cirrhosa D. Don, and Comparative Analysis with Other Fritillaria Species

(2017) Inkyu Park et al.   MOLECULES

The Complete Chloroplast Genomes of Three Cardiocrinum (Liliaceae) Species: Comparative Genomic and Phylogenetic Analyses

(2017) Rui-Sen Lu et al.   Frontiers in Plant Science

Comparative Genomics and Phylogenomics of East Asian Tulips (Amana, Liliaceae)

(2017) Pan Li et al.   Frontiers in Plant Science

The Complete Chloroplast Genome of Chinese Bayberry (Morella rubra, Myricaceae): Implications for Understanding the Evolution of Fagales

(2017) Lu-Xian Liu et al.   Frontiers in Plant Science

Complete Chloroplast Genome Sequences and Comparative Analysis of Chenopodium quinoa and C. album

(2017) Su-Young Hong et al.   Frontiers in Plant Science

Chloroplast genomes of Lilium lancifolium, L. amabile, L. callosum, and L. philadelphicum: Molecular characterization and their use in phylogenetic analysis in the genus Lilium and other allied genera in the order Liliales

(2017) Jong-Hwa Kim et al.   PLoS One

Complete chloroplast genome sequences of Lilium: insights into evolutionary dynamics and phylogenetic analyses

(2017) Yun-peng Du et al.   Scientific Reports

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

(2016) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

The complete chloroplast genome of Lilium taliense, an endangered species endemic to China

(2016) Qian Zhang et al.   Conservation Genetics Resources

The complete chloroplast genome of Lilium cernuum: genome structure and evolution

(2016) Yunpeng Du et al.   Conservation Genetics Resources

The complete chloroplast genome sequence of Lilium fargesii (Lilium, Liliaceae)

(2016) Yu Bi et al.   Conservation Genetics Resources

Accommodating Nomocharis in Lilium (Liliaceae)

(2016) YUN-DONG GAO et al.   Phytotaxa

The Complete Chloroplast Genome Sequences of Five Epimedium Species: Lights into Phylogenetic and Taxonomic Analyses

(2016) Yanjun Zhang et al.   Frontiers in Plant Science

Complete Chloroplast Genome Sequence of Aquilaria sinensis (Lour.) Gilg and Evolution Analysis within the Malvales Order

(2016) Ying Wang et al.   Frontiers in Plant Science

The Complete Chloroplast Genome Sequences for Four Amaranthus Species (Amaranthaceae)

(2016) Lindsay Chaney et al.   Applications in Plant Sciences

The complete chloroplast genome of Lilium distichum Nakai (Liliaceae)

(2016) Yoon-Jung Hwang et al.   Mitochondrial DNA Part A

The complete chloroplast genome sequence of Lilium tsingtauense Gilg (sect. Martagon, Liliaceae)

(2016) Ji Hee Song et al.   Mitochondrial DNA Part B-Resources

Intraspecific and heteroplasmic variations, gene losses and inversions in the chloroplast genome of Astragalus membranaceus

(2016) Wanjun Lei et al.   Scientific Reports

Morphological and ecological divergence of Lilium and Nomocharis within the Hengduan Mountains and Qinghai-Tibetan Plateau may result from habitat specialization and hybridization

(2015) Yun-Dong Gao et al.   BMC EVOLUTIONARY BIOLOGY

Chemistry and biological activity of steroidal glycosides from the Lilium genus

(2015) John P. Munafo Jr et al.   NATURAL PRODUCT REPORTS

Evolutionary dynamics of the plastid inverted repeat: the effects of expansion, contraction, and loss on substitution rates

(2015) Andan Zhu et al.   NEW PHYTOLOGIST

The complete chloroplast genome provides insight into the evolution and polymorphism of Panax ginseng

(2015) Yongbing Zhao et al.   Frontiers in Plant Science

Analysis of the Complete Chloroplast Genome of a Medicinal Plant, Dianthus superbus var. longicalyncinus, from a Comparative Genomics Perspective

(2015) Gurusamy Raman et al.   PLoS One

Thirteen Camellia chloroplast genome sequences determined by high-throughput sequencing: genome structure and phylogenetic relationships

(2014) Hui Huang et al.   BMC EVOLUTIONARY BIOLOGY

Lilium yapingense(Liliaceae), a New Species from Yunnan, China, and its Systematic Significance Relative toNomocharis

(2013) Yun-Dong Gao et al.   ANNALES BOTANICI FENNICI

Molecular phylogeny and genetic variation in the genus Lilium native to China based on the internal transcribed spacer sequences of nuclear ribosomal DNA

(2013) Yun-peng Du et al.   JOURNAL OF PLANT RESEARCH

Evolutionary events in Lilium (including Nomocharis, Liliaceae) are temporally correlated with orogenies of the Q–T plateau and the Hengduan Mountains

(2013) Yun-Dong Gao et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

A recurring syndrome of accelerated plastid genome evolution in the angiosperm tribe Sileneae (Caryophyllaceae)

(2013) Daniel B. Sloan et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

OrganellarGenomeDRAW—a suite of tools for generating physical maps of plastid and mitochondrial genomes and visualizing expression data sets

(2013) Marc Lohse et al.   NUCLEIC ACIDS RESEARCH

Comparative Genome Analysis and Phylogenetic Relationship of Order Liliales Insight from the Complete Plastid Genome Sequences of Two Lilies (Lilium longiflorum and Alstroemeria aurea)

(2013) Jung Sung Kim et al.   PLoS One

Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data

(2012) M. Kearse et al.   BIOINFORMATICS

jModelTest 2: more models, new heuristics and parallel computing

(2012) Diego Darriba et al.   NATURE METHODS

SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler

(2012) Ruibang Luo et al.   GigaScience

Major Lineages of the Genus Lilium (Liliaceae) Based on nrDNA ITS Sequences, with Special Emphasis on the Korean Species

(2011) Chang Shook Lee et al.   JOURNAL OF PLANT BIOLOGY

Chloroplast genomes of photosynthetic eukaryotes

(2011) Beverley R. Green   PLANT JOURNAL

The evolution of the plastid chromosome in land plants: gene content, gene order, gene function

(2011) Susann Wicke et al.   PLANT MOLECULAR BIOLOGY

trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses

(2009) S. Capella-Gutierrez et al.   BIOINFORMATICS

Increasing phylogenetic resolution at low taxonomic levels using massively parallel sequencing of chloroplast genomes

(2009) Matthew Parks et al.   BMC BIOLOGY

Chromosome diversity and evolution in Liliaceae

(2008) L. Peruzzi et al.   ANNALS OF BOTANY