Proteomics ofAspergillus fumigatusConidia-containing Phagolysosomes Identifies Processes Governing Immune Evasion

ModuleDiscoverer: Identification of regulatory modules in protein-protein interaction networks

(2018) Sebastian Vlaic et al.   Scientific Reports

Melanin targets LC3-associated phagocytosis (LAP): A novel pathogenetic mechanism in fungal disease

(2016) Georgios Chamilos et al.   Autophagy

Aspergillus Cell Wall Melanin Blocks LC3-Associated Phagocytosis to Promote Pathogenicity

(2016) Tonia Akoumianaki et al.   Cell Host & Microbe

Quantitative Proteome Analysis of Temporally Resolved Phagosomes Following Uptake Via Key Phagocytic Receptors

(2015) Brian D. Dill et al.   MOLECULAR & CELLULAR PROTEOMICS

ATG14 promotes membrane tethering and fusion of autophagosomes to endolysosomes

(2015) Jiajie Diao et al.   NATURE

Rubicon swaps autophagy for LAP

(2015) Keith B. Boyle et al.   NATURE CELL BIOLOGY

Molecular characterization of LC3-associated phagocytosis reveals distinct roles for Rubicon, NOX2 and autophagy proteins

(2015) Jennifer Martinez et al.   NATURE CELL BIOLOGY

2016 update of the PRIDE database and its related tools

(2015) Juan Antonio Vizcaíno et al.   NUCLEIC ACIDS RESEARCH

High-resolution quantitative proteome analysis reveals substantial differences between phagosomes of RAW 264.7 and bone marrow derived macrophages

(2015) Manman Guo et al.   PROTEOMICS

Integrated inference and evaluation of host–fungi interaction networks

(2015) Christian W. Remmele et al.   Frontiers in Microbiology

STRING v10: protein–protein interaction networks, integrated over the tree of life

(2014) Damian Szklarczyk et al.   NUCLEIC ACIDS RESEARCH

Interference of Aspergillus fumigatus with the immune response

(2014) Thorsten Heinekamp et al.   Seminars in Immunopathology

TNF Dually Mediates Resistance and Susceptibility to Mycobacteria via Mitochondrial Reactive Oxygen Species

(2013) Francisco J. Roca et al.   CELL

Monocyte- and Macrophage-Targeted NADPH Oxidase Mediates Antifungal Host Defense and Regulation of Acute Inflammation in Mice

(2013) M. J. Grimm et al.   JOURNAL OF IMMUNOLOGY

The TSC-mTOR pathway regulates macrophage polarization

(2013) Vanessa Byles et al.   Nature Communications

Aspergillus fumigatus melanins: interference with the host endocytosis pathway and impact on virulence

(2013) Thorsten Heinekamp et al.   Frontiers in Microbiology

Proteomic Characterization of Phagosomal Membrane Microdomains During Phagolysosome Biogenesis and Evolution

(2012) Guillaume Goyette et al.   MOLECULAR & CELLULAR PROTEOMICS

Persistence versus Escape: Aspergillus terreus and Aspergillus fumigatus Employ Different Strategies during Interactions with Macrophages

(2012) Silvia Slesiona et al.   PLoS One

Hidden Killers: Human Fungal Infections

(2012) G. D. Brown et al.   Science Translational Medicine

Lipid-Labeling Facilitates a Novel Magnetic Isolation Procedure to Characterize Pathogen-Containing Phagosomes

(2012) Christine Steinhäuser et al.   TRAFFIC

Sleeping with the Enemy: How Intracellular Pathogens Cope with a Macrophage Lifestyle

(2012) Emily P. Thi et al.   PLoS Pathogens

Highly interconnected genes in disease-specific networks are enriched for disease-associated polymorphisms

(2012) Fredrik Barrenäs et al.   GENOME BIOLOGY

Phagocytosis of melanized Aspergillus conidia by macrophages exerts cytoprotective effects by sustained PI3K/Akt signalling

(2011) Katrin Volling et al.   CELLULAR MICROBIOLOGY

TLR signalling augments macrophage bactericidal activity through mitochondrial ROS

(2011) A. Phillip West et al.   NATURE

Ensembl BioMarts: a hub for data retrieval across taxonomic space

(2011) R. J. Kinsella et al.   Database-The Journal of Biological Databases and Curation

Conidial Dihydroxynaphthalene Melanin of the Human Pathogenic Fungus Aspergillus fumigatus Interferes with the Host Endocytosis Pathway

(2011) Andreas Thywißen et al.   Frontiers in Microbiology

Prospective Surveillance for Invasive Fungal Infections in Hematopoietic Stem Cell Transplant Recipients, 2001–2006: Overview of the Transplant‐Associated Infection Surveillance Network (TRANSNET) Database

(2010) Dimitrios P. Kontoyiannis et al.   CLINICAL INFECTIOUS DISEASES

Organelle Membrane Proteomics Reveals Differential Influence of Mycobacterial Lipoglycans on Macrophage Phagosome Maturation and Autophagosome Accumulation

(2010) Wenqing Shui et al.   JOURNAL OF PROTEOME RESEARCH

The Role of Mitochondria in Apoptosis

(2009) Chunxin Wang et al.   Annual Review of Genetics

Pathogenesis of Aspergillus fumigatus in Invasive Aspergillosis

(2009) T. R. T. Dagenais et al.   CLINICAL MICROBIOLOGY REVIEWS

Innate Immunity to Aspergillus Species

(2009) S. J. Park et al.   CLINICAL MICROBIOLOGY REVIEWS

The Phagosomal Proteome in Interferon-γ-Activated Macrophages

(2009) Matthias Trost et al.   IMMUNITY

The Mycobacterium bovis Bacille Calmette-Guérin Phagosome Proteome

(2009) Bai-Yu Lee et al.   MOLECULAR & CELLULAR PROTEOMICS

Distinct regulation of autophagic activity by Atg14L and Rubicon associated with Beclin 1–phosphatidylinositol-3-kinase complex

(2009) Yun Zhong et al.   NATURE CELL BIOLOGY

Mapping identifiers for the integration of genomic datasets with the R/Bioconductor package biomaRt

(2009) Steffen Durinck et al.   Nature Protocols

Activation of antibacterial autophagy by NADPH oxidases

(2009) J. Huang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Quantitative Proteomic Profiling of Host−Pathogen Interactions: The Macrophage Response toMycobacterium tuberculosisLipids

(2008) Wenqing Shui et al.   JOURNAL OF PROTEOME RESEARCH

Regulation of the V-ATPase along the Endocytic Pathway Occurs through Reversible Subunit Association and Membrane Localization

(2008) Céline Lafourcade et al.   PLoS One

Membrane proteomics of phagosomes suggests a connection to autophagy

(2008) W. Shui et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA