Gene repression via multiplex gRNA strategy in Y. lipolytica

Iterative integration of multiple-copy pathway genes in Yarrowia lipolytica for heterologous β-carotene production

(2017) Shuliang Gao et al.   METABOLIC ENGINEERING

Transcriptional reprogramming in yeast using dCas9 and combinatorial gRNA strategies

(2017) Emil D. Jensen et al.   Microbial Cell Factories

New inducible promoter for gene expression and synthetic biology in Yarrowia lipolytica

(2017) Marion Trassaert et al.   Microbial Cell Factories

Using a vector pool containing variable-strength promoters to optimize protein production in Yarrowia lipolytica

(2017) Rémi Dulermo et al.   Microbial Cell Factories

Lipid production in Yarrowia lipolytica is maximized by engineering cytosolic redox metabolism

(2017) Kangjian Qiao et al.   NATURE BIOTECHNOLOGY

FnCpf1: a novel and efficient genome editing tool for Saccharomyces cerevisiae

(2017) Michal A. Świat et al.   NUCLEIC ACIDS RESEARCH

Generation of targeted mutant rice using a CRISPR-Cpf1 system

(2017) Rongfang Xu et al.   PLANT BIOTECHNOLOGY JOURNAL

Bug mapping and fitness testing of chemically synthesized chromosome X

(2017) Yi Wu et al.   SCIENCE

“Perfect” designer chromosome V and behavior of a ring derivative

(2017) Ze-Xiong Xie et al.   SCIENCE

Efficient Transcriptional Gene Repression by Type V-A CRISPR-Cpf1 from Eubacterium eligens

(2017) Seong Keun Kim et al.   ACS Synthetic Biology

CRISPRi–sRNA: Transcriptional–Translational Regulation of Extracellular Electron Transfer in Shewanella oneidensis

(2017) Yingxiu Cao et al.   ACS Synthetic Biology

Multiplex gene regulation by CRISPR-ddCpf1

(2017) Xiaochun Zhang et al.   Cell Discovery

Golden Gate Assembly system dedicated to complex pathway manipulation inYarrowia lipolytica

(2017) Ewelina Celińska et al.   Microbial Biotechnology

Heterologous production of α-farnesene in metabolically engineered strains of Yarrowia lipolytica

(2016) Xia Yang et al.   BIORESOURCE TECHNOLOGY

Exploring fatty alcohol-producing capability of Yarrowia lipolytica

(2016) Guokun Wang et al.   Biotechnology for Biofuels

Metabolic engineering of oleaginous yeast Yarrowia lipolytica for limonene overproduction

(2016) Xuan Cao et al.   Biotechnology for Biofuels

Type V CRISPR-Cas Cpf1 endonuclease employs a unique mechanism for crRNA-mediated target DNA recognition

(2016) Pu Gao et al.   CELL RESEARCH

Lipid biosynthesis in yeasts: A comparison of the lipid biosynthetic pathway between the model nonoleaginous yeastSaccharomyces cerevisiaeand the model oleaginous yeastYarrowia lipolytica

(2016) Stylianos Fakas   ENGINEERING IN LIFE SCIENCES

Quantitative image analysis as a tool for Yarrowia lipolytica dimorphic growth evaluation in different culture media

(2016) A. Braga et al.   JOURNAL OF BIOTECHNOLOGY

Multiplex gene editing of the Yarrowia lipolytica genome using the CRISPR-Cas9 system

(2016) Shuliang Gao et al.   JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY

Cloning and characterization of a robust recombinant azoreductase from Shewanella xiamenensis BC01

(2016) Xia Zhang et al.   Journal of the Taiwan Institute of Chemical Engineers

Combining metabolic engineering and process optimization to improve production and secretion of fatty acids

(2016) Rodrigo Ledesma-Amaro et al.   METABOLIC ENGINEERING

Metabolic engineering of Yarrowia lipolytica to produce chemicals and fuels from xylose

(2016) Rodrigo Ledesma-Amaro et al.   METABOLIC ENGINEERING

Production of 1-decanol by metabolically engineered Yarrowia lipolytica

(2016) Charles D. Rutter et al.   METABOLIC ENGINEERING

CRISPR interference-guided balancing of a biosynthetic mevalonate pathway increases terpenoid production

(2016) Seong Keun Kim et al.   METABOLIC ENGINEERING

Identifying and Visualizing Functional PAM Diversity across CRISPR-Cas Systems

(2016) Ryan T. Leenay et al.   MOLECULAR CELL

Generation of knockout mice by Cpf1-mediated gene targeting

(2016) Yongsub Kim et al.   NATURE BIOTECHNOLOGY

Targeted mutagenesis in mice by electroporation of Cpf1 ribonucleoproteins

(2016) Junho K Hur et al.   NATURE BIOTECHNOLOGY

Integrated bioprocess for conversion of gaseous substrates to liquids

(2016) Peng Hu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

EngineeringYarrowia lipolyticaas a platform for synthesis of drop-in transportation fuels and oleochemicals

(2016) Peng Xu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Metabolic Engineering for Expanding the Substrate Range of Yarrowia lipolytica

(2016) Rodrigo Ledesma-Amaro et al.   TRENDS IN BIOTECHNOLOGY

Biotechnological production of γ-decalactone, a peach like aroma, by Yarrowia lipolytica

(2016) A. Braga et al.   WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY

Production of fatty acid-derived oleochemicals and biofuels by synthetic yeast cell factories

(2016) Yongjin J. Zhou et al.   Nature Communications

Standardized Markerless Gene Integration for Pathway Engineering in Yarrowia lipolytica

(2016) Cory Schwartz et al.   ACS Synthetic Biology

Synthetic RNA Polymerase III Promoters Facilitate High-Efficiency CRISPR–Cas9-Mediated Genome Editing in Yarrowia lipolytica

(2016) Cory M. Schwartz et al.   ACS Synthetic Biology

Cpf1 Is A Versatile Tool for CRISPR Genome Editing Across Diverse Species of Cyanobacteria

(2016) Justin Ungerer et al.   Scientific Reports

Engineering Yarrowia lipolytica for production of medium-chain fatty acids

(2015) Charles D. Rutter et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Engineering Complex Synthetic Transcriptional Programs with CRISPR RNA Scaffolds

(2015) Jesse G. Zalatan et al.   CELL

Cpf1 Is a Single RNA-Guided Endonuclease of a Class 2 CRISPR-Cas System

(2015) Bernd Zetsche et al.   CELL

The oxidative pentose phosphate pathway is the primary source of NADPH for lipid overproduction from glucose in Yarrowia lipolytica

(2015) Thomas M. Wasylenko et al.   METABOLIC ENGINEERING

Gene silencing by CRISPR interference in mycobacteria

(2015) Eira Choudhary et al.   Nature Communications

Multiple Gene Repression in Cyanobacteria Using CRISPRi

(2015) Lun Yao et al.   ACS Synthetic Biology

One-step integration of multiple genes into the oleaginous yeast Yarrowia lipolytica

(2014) Shuliang Gao et al.   BIOTECHNOLOGY LETTERS

Multi-input CRISPR/Cas genetic circuits that interface host regulatory networks

(2014) A. A. Nielsen et al.   Molecular Systems Biology

Dimeric CRISPR RNA-guided FokI nucleases for highly specific genome editing

(2014) Shengdar Q Tsai et al.   NATURE BIOTECHNOLOGY

Repurposing CRISPR as an RNA-Guided Platform for Sequence-Specific Control of Gene Expression

(2013) Lei S. Qi et al.   CELL

CRISPR-Mediated Modular RNA-Guided Regulation of Transcription in Eukaryotes

(2013) Luke A. Gilbert et al.   CELL

Yarrowia lipolytica: Safety assessment of an oleaginous yeast with a great industrial potential

(2013) Marizeth Groenewald et al.   CRITICAL REVIEWS IN MICROBIOLOGY

Cas9 as a versatile tool for engineering biology

(2013) Prashant Mali et al.   NATURE METHODS

Programmable repression and activation of bacterial gene expression using an engineered CRISPR-Cas system

(2013) David Bikard et al.   NUCLEIC ACIDS RESEARCH

Phylogeny of Cas9 determines functional exchangeability of dual-RNA and Cas9 among orthologous type II CRISPR-Cas systems

(2013) Ines Fonfara et al.   NUCLEIC ACIDS RESEARCH

Characterization of the mitochondrial NAD+-dependent isocitrate dehydrogenase of the oleaginous yeast Rhodosporidium toruloides

(2012) Fan Yang et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

A Synthetic Biology Framework for Programming Eukaryotic Transcription Functions

(2012) Ahmad S. Khalil et al.   CELL

Methods and applications for assembling large DNA constructs

(2012) Chuck Merryman et al.   METABOLIC ENGINEERING

Engineering the push and pull of lipid biosynthesis in oleaginous yeast Yarrowia lipolytica for biofuel production

(2012) Mitchell Tai et al.   METABOLIC ENGINEERING

Tuning Gene Expression in Yarrowia lipolytica by a Hybrid Promoter Approach

(2011) John Blazeck et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Alternative routes of acetyl-CoA synthesis identified by comparative genomic analysis: involvement in the lipid production of oleaginous yeast and fungi

(2011) T. Vorapreeda et al.   MICROBIOLOGY-SGM

The CRISPR/Cas bacterial immune system cleaves bacteriophage and plasmid DNA

(2010) Josiane E. Garneau et al.   NATURE

Yarrowia lipolytica as a model for bio-oil production

(2009) Athanasios Beopoulos et al.   PROGRESS IN LIPID RESEARCH